CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ecym_7252
(
Eremothecium cymbalariae
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
Ecym_7252
T327413_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
IXR1
M08429_2.00
Saccharomyces cerevisiae
CMCCGCTYCCGGYTT
AARCCGGRAGCGGKG
ChIP-chip
Mathelier et al.(2014)
MA0323.1
0.630
0.691
IXR1
M11345_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$IXR1_01
0.630
0.691
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AET41096
Sox
295
363
PKRPSSAYFLFSMSIREELLRQYPDAKVPELSKLSSARWKELSEEDKKPFYGQFKDNWEKYRIAKKEYE
AET41096
Sox
368
434
PKRPSGPFIQFTSELRPKLLKDNPDKSLIEITKLVGEQWRNLPSEEKQKYTDAYKQKLKEWEEFYPE
Links
Other
Sox
family TFs
Other
Eremothecium cymbalariae
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy