EFV51436 (Trichinella spiralis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 EFV51436 T327418_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EFV51436 Sox 157 201

Links

Other Sox family TFs
Other Trichinella spiralis TFs

129 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT5G04760 Arabidopsis thaliana AT5G04760 D 0.000
Ciclev10016071m.g Citrus clementina Ciclev10016071m.g I 0.000
Carubv10003623m.g Capsella rubella Carubv10003623m.g I 0.000
Cagra.5249s0014 Capsella grandiflora Cagra.5249s0014 I 0.000
Bostr.13129s0486 Boechera stricta Bostr.13129s0486 I 0.000
Aquca_035_00057 Aquilegia coerulea Aquca_035_00057 I 0.000
mgf009460m Mimulus guttatus mgf009460m I 0.000
Cucsa.280970 Cucumis sativus Cucsa.280970 I 0.000
Cucsa.013870 Cucumis sativus Cucsa.013870 I 0.000
cassava18614.valid.m1 Manihot esculenta cassava18614.valid.m1 I 0.000
30131.m007263 Ricinus communis 30131.m007263 I 0.000
30055.m001589 Ricinus communis 30055.m001589 I 0.000
Pm017050 Prunus mume Pm017050 I 0.000
Pm006046 Prunus mume Pm006046 I 0.000
Cla020348 Citrullus lanatus Cla020348 I 0.000
Cla009230 Citrullus lanatus Cla009230 I 0.000
Ciclev10032259m.g Citrus clementina Ciclev10032259m.g I 0.000
Eucgr.G02591 Eucalyptus grandis Eucgr.G02591 I 0.000
Thhalv10014613m.g Eutrema salsugineum Thhalv10014613m.g I 0.000
SapurV1A.1671s0040 Salix purpurea SapurV1A.1671s0040 I 0.000
SapurV1A.0450s0110 Salix purpurea SapurV1A.0450s0110 I 0.000
SapurV1A.0234s0050 Salix purpurea SapurV1A.0234s0050 I 0.000
SapurV1A.0036s0350 Salix purpurea SapurV1A.0036s0350 I 0.000
orange1.1g022439m.g Citrus sinensis orange1.1g022439m.g I 0.000
PK13672.1 Cannabis sativa PK13672.1 I 0.000
MDP0000289018 Malus domestica MDP0000289018 I 0.000
Gorai.013G067600 Gossypium raimondii Gorai.013G067600 I 0.000
Gorai.012G135600 Gossypium raimondii Gorai.012G135600 I 0.000
Gorai.008G147400 Gossypium raimondii Gorai.008G147400 I 0.000
Gorai.006G118200 Gossypium raimondii Gorai.006G118200 I 0.000
Gorai.005G212900 Gossypium raimondii Gorai.005G212900 I 0.000
gene23544-v1.0-hybrid Fragaria vesca gene23544-v1.0-hybrid I 0.000
evm.TU.supercontig_138.5 Carica papaya evm.TU.supercontig_138.5 I 0.000
Ca_19000 Cicer arietinum Ca_19000 I 0.000
Ca_05454 Cicer arietinum Ca_05454 I 0.000
Bo2g006670 Brassica oleracea Bo2g006670 I 0.000
PGSC0003DMG400025303 Solanum tuberosum PGSC0003DMG400025303 I 0.000
Bra009432 Brassica rapa Bra009432 I 0.000
GSMUA_Achr9G23760_001 Musa acuminata GSMUA_Achr9G23760_001 I 0.000
GSMUA_Achr9G20620_001 Musa acuminata GSMUA_Achr9G20620_001 I 0.000
GSMUA_Achr1G17730_001 Musa acuminata GSMUA_Achr1G17730_001 I 0.000
GLYMA20G24600 Glycine max GLYMA20G24600 I 0.000
GLYMA20G01450 Glycine max GLYMA20G01450 I 0.000
GLYMA18G18140 Glycine max GLYMA18G18140 I 0.000
GLYMA10G42450 Glycine max GLYMA10G42450 I 0.000
GLYMA08G40020 Glycine max GLYMA08G40020 I 0.000
GLYMA07G28310 Glycine max GLYMA07G28310 I 0.000
Bra028780 Brassica rapa Bra028780 I 0.000
Bra005818 Brassica rapa Bra005818 I 0.000
Bo9g178980 Brassica oleracea Bo9g178980 I 0.000
Bo3g002960 Brassica oleracea Bo3g002960 I 0.000
PRUPE_ppa009396mg Prunus persica PRUPE_ppa009396mg I 0.000
PRUPE_ppa010926mg Prunus persica PRUPE_ppa010926mg I 0.000
scaffold_600421.1 Arabidopsis lyrata scaffold_600421.1 I 0.000
VIT_10s0071g00660 Vitis vinifera VIT_10s0071g00660 I 0.000
VIT_06s0080g00790 Vitis vinifera VIT_06s0080g00790 I 0.000
TCM_007672 Theobroma cacao TCM_007672 I 0.000
TCM_041160 Theobroma cacao TCM_041160 I 0.000
Aquca_072_00078 Aquilegia coerulea Aquca_072_00078 N 0.000
TCM_041362 Theobroma cacao TCM_041362 N 0.000
orange1.1g026855m.g Citrus sinensis orange1.1g026855m.g N 0.000
Pavir.Ga00233 Panicum virgatum Pavir.Ga00233 N 0.000
Pavir.Gb00055 Panicum virgatum Pavir.Gb00055 N 0.000
Ciclev10029205m.g Citrus clementina Ciclev10029205m.g N 0.000
Cla014242 Citrullus lanatus Cla014242 N 0.000
Cla013899 Citrullus lanatus Cla013899 N 0.000
Solyc11g006720.1 Solanum lycopersicum Solyc11g006720.1 N 0.000
Solyc05g055240.2 Solanum lycopersicum Solyc05g055240.2 N 0.000
Si022762m.g Setaria italica Si022762m.g N 0.000
gw1.13.182.1 Physcomitrella patens gw1.13.182.1 N 0.000
PGSC0003DMG400023495 Solanum tuberosum PGSC0003DMG400023495 N 0.000
PGSC0003DMG400007603 Solanum tuberosum PGSC0003DMG400007603 N 0.000
e_gw1.256.18.1 Physcomitrella patens e_gw1.256.18.1 N 0.000
Cucsa.364590 Cucumis sativus Cucsa.364590 N 0.000
GSMUA_Achr9G21870_001 Musa acuminata GSMUA_Achr9G21870_001 N 0.000
SELMODRAFT_47760 Selaginella moellendorffii SELMODRAFT_47760 N 0.000
Cucsa.103200 Cucumis sativus Cucsa.103200 N 0.000
GSMUA_Achr11G09110_001 Musa acuminata GSMUA_Achr11G09110_001 N 0.000
Gorai.006G113100 Gossypium raimondii Gorai.006G113100 N 0.000
SELMODRAFT_47768 Selaginella moellendorffii SELMODRAFT_47768 N 0.000
MDP0000610242 Malus domestica MDP0000610242 N 0.000