EMIHUDRAFT_117867 (Emiliania huxleyi)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 EMIHUDRAFT_117867 T327458_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YAB5
M02486_2.00 		Arabidopsis thaliana
NNNNHRN
NYDNNNN		 PBM
Weirauch et al.(2014)
pTH7575 		0.440 0.267
YAB5
M00889_2.00 		Arabidopsis thaliana
NATRATTADNNN
NNNHTAATYATN		 PBM
Franco-Zorrilla et al.(2014)
YAB5 		0.440 0.267
YAB1
M00890_2.00 		Arabidopsis thaliana
AATAATWA
TWATTATT		 PBM
Franco-Zorrilla et al.(2014)
YAB1 		0.440 0.267
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOD19731 Sox 337 381

Links

Other Sox family TFs
Other Emiliania huxleyi TFs

245 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSPMAG00000002918 Petromyzon marinus ENSPMAG00000002918 N 0.580
fgenesh2_pg.scaffold_5000103 Monosiga brevicollis fgenesh2_pg.scaffold_5000103 N 0.535
PTSG_02585 Salpingoeca rosetta PTSG_02585 N 0.522
fgenesh2_pg.C_Chr_03000283 Micromonas sp RCC299 fgenesh2_pg.C_Chr_03000283 N 0.507
PLICRDRAFT_179042 Plicaturopsis crispa PLICRDRAFT_179042 I 0.497
AMSG_09450 Thecamonas trahens AMSG_09450 N 0.492
DAPPUDRAFT_306626 Daphnia pulex DAPPUDRAFT_306626 N 0.490
Moror_16065 Moniliophthora roreri Moror_16065 I 0.489
SOCG_00309 Schizosaccharomyces octosporus SOCG_00309 N 0.487
LotgiG105193 Lottia gigantea LotgiG105193 N 0.486
SPOG_02196 Schizosaccharomyces cryophilus SPOG_02196 N 0.482
D917_07703 Trichinella nativa D917_07703 N 0.480
EFV51436 Trichinella spiralis EFV51436 N 0.480
CAOG_02676 Capsaspora owczarzaki CAOG_02676 N 0.479
CNG00580 Cryptococcus neoformans CNG00580 N 0.475
V565_033960 Rhizoctonia solani V565_033960 N 0.469
CapteG178344 Capitella teleta CapteG178344 N 0.469
BATDEDRAFT_7789 Batrachochytrium dendrobatidis BATDEDRAFT_7789 I 0.460
GSMUA_Achr3G15060_001 Musa acuminata GSMUA_Achr3G15060_001 I 0.457
GSMUA_Achr8G26600_001 Musa acuminata GSMUA_Achr8G26600_001 I 0.457
LDEC009506 Leptinotarsa decemlineata LDEC009506 N 0.453
TMUE_s0148001000 Trichuris muris TMUE_s0148001000 N 0.452
GSMUA_Achr3G25660_001 Musa acuminata GSMUA_Achr3G25660_001 I 0.451
GSMUA_AchrUn_randomG19410_001 Musa acuminata GSMUA_AchrUn_randomG19410_001 I 0.451
BRADI1G57070 Brachypodium distachyon BRADI1G57070 I 0.451
GSMUA_Achr3G30800_001 Musa acuminata GSMUA_Achr3G30800_001 I 0.451
D918_07944 Trichuris suis D918_07944 N 0.451
GSMUA_Achr8G04750_001 Musa acuminata GSMUA_Achr8G04750_001 I 0.451
CGI_10027770 Crassostrea gigas CGI_10027770 N 0.450
TC012902 Tribolium castaneum TC012902 N 0.447
GLOTRDRAFT_107384 Gloeophyllum trabeum GLOTRDRAFT_107384 I 0.446
GSMUA_Achr2G12850_001 Musa acuminata GSMUA_Achr2G12850_001 I 0.446
Gorai.009G367100 Gossypium raimondii Gorai.009G367100 I 0.446
ACYPI006465 Acyrthosiphon pisum ACYPI006465 N 0.446
MTR_8g018100 Medicago truncatula MTR_8g018100 N 0.446
Lus10032240.g Linum usitatissimum Lus10032240.g I 0.445
Lus10024603.g Linum usitatissimum Lus10024603.g I 0.445
TriadG56122 Trichoplax adhaerens TriadG56122 N 0.443
29854.m001136 Ricinus communis 29854.m001136 I 0.440
Traes_5AS_31C2540C0 Triticum aestivum Traes_5AS_31C2540C0 I 0.440
Traes_5AL_EB97D69D7 Triticum aestivum Traes_5AL_EB97D69D7 I 0.440
TCM_041175 Theobroma cacao TCM_041175 I 0.440
Pm027559 Prunus mume Pm027559 I 0.440
Pm001547 Prunus mume Pm001547 I 0.440
SapurV1A.0034s0500 Salix purpurea SapurV1A.0034s0500 I 0.440
Sb01g013270 Sorghum bicolor Sb01g013270 I 0.440
TCM_038105 Theobroma cacao TCM_038105 I 0.440
Solyc07g008180.2 Solanum lycopersicum Solyc07g008180.2 I 0.440
Pavir.Ib04136 Panicum virgatum Pavir.Ib04136 I 0.440
Solyc11g071810.1 Solanum lycopersicum Solyc11g071810.1 I 0.440
Si037789m.g Setaria italica Si037789m.g I 0.440
Si023308m.g Setaria italica Si023308m.g I 0.440
cassava13510.valid.m1 Manihot esculenta cassava13510.valid.m1 I 0.440
29927.m000626 Ricinus communis 29927.m000626 I 0.440
cassava13509.valid.m1 Manihot esculenta cassava13509.valid.m1 I 0.440
Cla012424 Citrullus lanatus Cla012424 I 0.440
Traes_5BL_4DEC298F9 Triticum aestivum Traes_5BL_4DEC298F9 I 0.440
Sb02g003390 Sorghum bicolor Sb02g003390 I 0.440
Si030811m.g Setaria italica Si030811m.g I 0.440
TRIUR3_18590 Triticum urartu TRIUR3_18590 I 0.440
Traes_5DS_268147383 Triticum aestivum Traes_5DS_268147383 I 0.440
Sb08g022030 Sorghum bicolor Sb08g022030 I 0.440
AFO Arabidopsis lyrata scaffold_403460.1 I 0.440
Traes_5DL_0E369E1FC Triticum aestivum Traes_5DL_0E369E1FC I 0.440
TRIUR3_27402 Triticum urartu TRIUR3_27402 I 0.440
Solyc08g079100.2 Solanum lycopersicum Solyc08g079100.2 I 0.440
Ca_06681 Cicer arietinum Ca_06681 I 0.440
Ca_07101 Cicer arietinum Ca_07101 I 0.440
Cla008752 Citrullus lanatus Cla008752 I 0.440
YAB5 Vitis vinifera VIT_11s0016g05590 I 0.440
VIT_08s0032g01110 Vitis vinifera VIT_08s0032g01110 I 0.440
SapurV1A.0258s0090 Salix purpurea SapurV1A.0258s0090 I 0.440
Traes_5BS_A782F7510 Triticum aestivum Traes_5BS_A782F7510 I 0.440
Solyc06g073920.2 Solanum lycopersicum Solyc06g073920.2 I 0.440
mgf015972m Mimulus guttatus mgf015972m I 0.440
evm.TU.supercontig_46.14 Carica papaya evm.TU.supercontig_46.14 I 0.440
gene03938-v1.0-hybrid Fragaria vesca gene03938-v1.0-hybrid I 0.440
gene31056-v1.0-hybrid Fragaria vesca gene31056-v1.0-hybrid I 0.440
Gorai.001G042700 Gossypium raimondii Gorai.001G042700 I 0.440
evm.TU.supercontig_104.5 Carica papaya evm.TU.supercontig_104.5 I 0.440
evm.TU.supercontig_103.34 Carica papaya evm.TU.supercontig_103.34 I 0.440
Ciclev10029354m.g Citrus clementina Ciclev10029354m.g I 0.440
Eucgr.C01515 Eucalyptus grandis Eucgr.C01515 I 0.440
Eucgr.D02474 Eucalyptus grandis Eucgr.D02474 I 0.440
Eucgr.J00587 Eucalyptus grandis Eucgr.J00587 I 0.440
Gorai.001G127000 Gossypium raimondii Gorai.001G127000 I 0.440
Gorai.006G117800 Gossypium raimondii Gorai.006G117800 I 0.440
MDP0000255415 Malus domestica MDP0000255415 I 0.440
MDP0000331808 Malus domestica MDP0000331808 I 0.440
MDP0000366291 Malus domestica MDP0000366291 I 0.440
MDP0000500810 Malus domestica MDP0000500810 I 0.440
MDP0000252640 Malus domestica MDP0000252640 I 0.440
orange1.1g029862m.g Citrus sinensis orange1.1g029862m.g I 0.440
Gorai.009G016700 Gossypium raimondii Gorai.009G016700 I 0.440
Gorai.010G062900 Gossypium raimondii Gorai.010G062900 I 0.440
Pavir.Ca02862 Panicum virgatum Pavir.Ca02862 I 0.440
Pavir.Ba03779 Panicum virgatum Pavir.Ba03779 I 0.440
Ciclev10009560m.g Citrus clementina Ciclev10009560m.g I 0.440
Carubv10024208m.g Capsella rubella Carubv10024208m.g I 0.440
Aquca_009_00652 Aquilegia coerulea Aquca_009_00652 I 0.440
Aquca_020_00105 Aquilegia coerulea Aquca_020_00105 I 0.440
Bostr.14547s0027 Boechera stricta Bostr.14547s0027 I 0.440
Bostr.22545s0001 Boechera stricta Bostr.22545s0001 I 0.440
PRUPE_ppa012028mg Prunus persica PRUPE_ppa012028mg I 0.440
mgf010765m Mimulus guttatus mgf010765m I 0.440
cassava39022.m1 Manihot esculenta cassava39022.m1 I 0.440
cassava40986.m1 Manihot esculenta cassava40986.m1 I 0.440
Cucsa.086660 Cucumis sativus Cucsa.086660 I 0.440
Cucsa.295080 Cucumis sativus Cucsa.295080 I 0.440
Bostr.25219s0098 Boechera stricta Bostr.25219s0098 I 0.440
Bostr.25993s0255 Boechera stricta Bostr.25993s0255 I 0.440
Carubv10001833m.g Capsella rubella Carubv10001833m.g I 0.440
Carubv10010384m.g Capsella rubella Carubv10010384m.g I 0.440
Pavir.Cb00070 Panicum virgatum Pavir.Cb00070 I 0.440
Carubv10024011m.g Capsella rubella Carubv10024011m.g I 0.440
Cagra.4395s0036 Capsella grandiflora Cagra.4395s0036 I 0.440
Cagra.1261s0010 Capsella grandiflora Cagra.1261s0010 I 0.440
Cagra.0239s0072 Capsella grandiflora Cagra.0239s0072 I 0.440
Pavir.Ia01130 Panicum virgatum Pavir.Ia01130 I 0.440
Cagra.11302s0003 Capsella grandiflora Cagra.11302s0003 I 0.440
cassava33847.m1 Manihot esculenta cassava33847.m1 I 0.440
YAB6 Oryza sativa OS12G0621100 I 0.440
YAB5 Arabidopsis lyrata fgenesh2_kg.4__584__AT2G26580.2 I 0.440
YAB3 Arabidopsis lyrata fgenesh2_kg.6__3684__AT4G00180.1 I 0.440
GLYMA06G46560 Glycine max GLYMA06G46560 I 0.440
Thhalv10028925m.g Eutrema salsugineum Thhalv10028925m.g I 0.440
YAB2 Arabidopsis lyrata fgenesh2_kg.1__861__AT1G08465.1 I 0.440
F775_28710 Aegilops tauschii F775_28710 I 0.440
BRADI1G13570 Brachypodium distachyon BRADI1G13570 I 0.440
BRADI4G01300 Brachypodium distachyon BRADI4G01300 I 0.440
PK09461.1 Cannabis sativa PK09461.1 I 0.440
PK06964.1 Cannabis sativa PK06964.1 I 0.440
GLYMA12G10210 Glycine max GLYMA12G10210 I 0.440
GLYMA12G31670 Glycine max GLYMA12G31670 I 0.440
GRMZM2G106204 Zea mays GRMZM2G106204 I 0.440
GRMZM2G141955 Zea mays GRMZM2G141955 I 0.440
Thhalv10008858m.g Eutrema salsugineum Thhalv10008858m.g I 0.440
PRUPE_ppa011880m2g Prunus persica PRUPE_ppa011880m2g I 0.440
GRMZM2G085873 Zea mays GRMZM2G085873 I 0.440
GRMZM2G074124 Zea mays GRMZM2G074124 I 0.440
GLYMA13G22620 Glycine max GLYMA13G22620 I 0.440
GLYMA13G38750 Glycine max GLYMA13G38750 I 0.440
GLYMA17G12200 Glycine max GLYMA17G12200 I 0.440
Thhalv10017320m.g Eutrema salsugineum Thhalv10017320m.g I 0.440
Bra040322 Brassica rapa Bra040322 I 0.440
Bra037320 Brassica rapa Bra037320 I 0.440
BGIOSGA037817 Oryza indica BGIOSGA037817 I 0.440
Bo3g037630 Brassica oleracea Bo3g037630 I 0.440
Bo3g041840 Brassica oleracea Bo3g041840 I 0.440
Bo4g195410 Brassica oleracea Bo4g195410 I 0.440
BGIOSGA013223 Oryza indica BGIOSGA013223 I 0.440
YAB3 Arabidopsis thaliana AT4G00180 I 0.440
AMTR_s00078p00029420 Amborella trichopoda AMTR_s00078p00029420 I 0.440
YAB2 Arabidopsis thaliana AT1G08465 I 0.440
YAB5 Arabidopsis thaliana AT2G26580 D 0.440
YAB1 Arabidopsis thaliana AT2G45190 D 0.440
Bo5g009010 Brassica oleracea Bo5g009010 I 0.440
Bo6g073320 Brassica oleracea Bo6g073320 I 0.440
Bra003309 Brassica rapa Bra003309 I 0.440
Bra018624 Brassica rapa Bra018624 I 0.440
Bra030728 Brassica rapa Bra030728 I 0.440
Bra031629 Brassica rapa Bra031629 I 0.440
Bra000538 Brassica rapa Bra000538 I 0.440
Bra000378 Brassica rapa Bra000378 I 0.440
Bo8g055830 Brassica oleracea Bo8g055830 I 0.440
Bo8g112450 Brassica oleracea Bo8g112450 I 0.440
Bo9g001130 Brassica oleracea Bo9g001130 I 0.440
GSMUA_Achr4G31310_001 Musa acuminata GSMUA_Achr4G31310_001 I 0.440
GSMUA_Achr4G22750_001 Musa acuminata GSMUA_Achr4G22750_001 I 0.440
ORUFI03G28820 Oryza rufipogon ORUFI03G28820 I 0.440
ORUFI07G03450 Oryza rufipogon ORUFI07G03450 I 0.440
ORUFI12G21410 Oryza rufipogon ORUFI12G21410 I 0.440
YAB2 Oryza sativa OS03G0650000 I 0.440
ORGLA12G0165000 Oryza glaberrima ORGLA12G0165000 I 0.440
OPUNC12G17340 Oryza punctata OPUNC12G17340 I 0.440
GSMUA_Achr6G31080_001 Musa acuminata GSMUA_Achr6G31080_001 I 0.440
ONIVA03G28660 Oryza nivara ONIVA03G28660 I 0.440
OPUNC03G25290 Oryza punctata OPUNC03G25290 I 0.440
OPUNC07G03670 Oryza punctata OPUNC07G03670 I 0.440
YAB1 Oryza sativa OS07G0160100 I 0.440
orange1.1g028980m.g Citrus sinensis orange1.1g028980m.g I 0.440
POPTR_0006s06700 Populus trichocarpa POPTR_0006s06700 I 0.440
SapurV1A.1100s0080 Salix purpurea SapurV1A.1100s0080 I 0.440
POPTR_0016s06760 Populus trichocarpa POPTR_0016s06760 I 0.440
POPTR_0018s12990 Populus trichocarpa POPTR_0018s12990 I 0.440
YAB2 Populus trichocarpa POPTR_0001s22180 I 0.440
PGSC0003DMG400030904 Solanum tuberosum PGSC0003DMG400030904 I 0.440
PGSC0003DMG400002988 Solanum tuberosum PGSC0003DMG400002988 I 0.440
PGSC0003DMG400004741 Solanum tuberosum PGSC0003DMG400004741 I 0.440
PGSC0003DMG400005936 Solanum tuberosum PGSC0003DMG400005936 I 0.440
OMERI12G13460 Oryza meridionalis OMERI12G13460 I 0.440
ONIVA02G03100 Oryza nivara ONIVA02G03100 I 0.440
MLOC_70676 Hordeum vulgare MLOC_70676 I 0.440
MTR_2g087740 Medicago truncatula MTR_2g087740 I 0.440
GSMUA_Achr7G01330_001 Musa acuminata GSMUA_Achr7G01330_001 I 0.440
MLOC_66260 Hordeum vulgare MLOC_66260 I 0.440
Thhalv10001617m.g Eutrema salsugineum Thhalv10001617m.g I 0.440
GSMUA_Achr7G07830_001 Musa acuminata GSMUA_Achr7G07830_001 I 0.440
LPERR03G22960 Leersia perrieri LPERR03G22960 I 0.440
LPERR07G03250 Leersia perrieri LPERR07G03250 I 0.440
MTR_4g050300 Medicago truncatula MTR_4g050300 I 0.440
MTR_4g114730 Medicago truncatula MTR_4g114730 I 0.440
OGLUM03G28370 Oryza glumaepatula OGLUM03G28370 I 0.440
OGLUM12G20870 Oryza glumaepatula OGLUM12G20870 I 0.440
OLONG_018568 Oryza longistaminata OLONG_018568 I 0.440
OMERI07G02330 Oryza meridionalis OMERI07G02330 I 0.440
OBART12G19190 Oryza barthii OBART12G19190 I 0.440
OBART03G27740 Oryza barthii OBART03G27740 I 0.440
OB03G35470 Oryza brachyantha OB03G35470 I 0.440
OB07G12810 Oryza brachyantha OB07G12810 I 0.440
OB12G26050 Oryza brachyantha OB12G26050 I 0.440
mgf012563m Mimulus guttatus mgf012563m I 0.436
nRc.2.0.1.g48254 Romanomermis culicivorax nRc.2.0.1.g48254 N 0.436
OSTLU_15490 Ostreococcus lucimarinus OSTLU_15490 N 0.432
Gorai.007G078500 Gossypium raimondii Gorai.007G078500 N 0.430
L892_g25427 Steinernema scapterisci L892_g25427 N 0.430
GSTUM_00007488001 Tuber melanosporum GSTUM_00007488001 N 0.429
SapurV1A.0269s0230 Salix purpurea SapurV1A.0269s0230 I 0.427
PRUPE_ppa023883mg Prunus persica PRUPE_ppa023883mg I 0.427
POPTR_0010s05220 Populus trichocarpa POPTR_0010s05220 I 0.427
Lus10029135.g Linum usitatissimum Lus10029135.g I 0.427
Pm006709 Prunus mume Pm006709 I 0.427
INO Vitis vinifera VIT_01s0127g00330 I 0.427
Lus10013028.g Linum usitatissimum Lus10013028.g I 0.427
ACEP23223 Atta cephalotes ACEP23223 N 0.425
ENSSHAG00000004107 Sarcophilus harrisii ENSSHAG00000004107 N 0.423
CHD4 Microcebus murinus ENSMICG00000006588 N 0.423
CHD4 Ochotona princeps ENSOPRG00000003477 N 0.423
ENSMODG00000024829 Monodelphis domestica ENSMODG00000024829 N 0.423
XP_002941963 Xenopus tropicalis XP_002941963 N 0.423
Carubv10012024m.g Capsella rubella Carubv10012024m.g I 0.423
cassava26804.m1 Manihot esculenta cassava26804.m1 I 0.423
AMTR_s00096p00054100 Amborella trichopoda AMTR_s00096p00054100 I 0.423
Cagra.0605s0067 Capsella grandiflora Cagra.0605s0067 I 0.423
CHD4 Echinops telfairi ENSETEG00000005912 N 0.423
XP_002163918.1 Hydra magnipapillata XP_002163918.1 I 0.422
SapurV1A.0069s0070 Salix purpurea SapurV1A.0069s0070 I 0.421
GLYMA18G19720 Glycine max GLYMA18G19720 I 0.421
GLYMA08G39290 Glycine max GLYMA08G39290 I 0.421
M404DRAFT_998370 Pisolithus tinctorius M404DRAFT_998370 N 0.420
Gorai.013G018500 Gossypium raimondii Gorai.013G018500 I 0.416
SapurV1A.0248s0170 Salix purpurea SapurV1A.0248s0170 I 0.416
BRADI1G29730 Brachypodium distachyon BRADI1G29730 I 0.415
Si007288m.g Setaria italica Si007288m.g I 0.415
GRMZM5G834758 Zea mays GRMZM5G834758 I 0.415