CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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EMIHUDRAFT_252069
(
Emiliania huxleyi
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
EMIHUDRAFT_252069
T327473_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOD37465
Sox
94
155
PGRPSPFMVFCQERRREIIRTNPSMGFRDIGRALGAAWAGFSDEQKRSYCVGLSSAGEAQRK
Links
Other
Sox
family TFs
Other
Emiliania huxleyi
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Gorai.001G198900
Gossypium raimondii
Gorai.001G198900
I
0.473
PNEG_03347
Pneumocystis murina
PNEG_03347
I
0.462
BGIOSGA023639
Oryza indica
BGIOSGA023639
I
0.448
SJAG_03603
Schizosaccharomyces japonicus
SJAG_03603
I
0.443
PGSC0003DMG400008501
Solanum tuberosum
PGSC0003DMG400008501
I
0.435
SapurV1A.2780s0020
Salix purpurea
SapurV1A.2780s0020
I
0.435
orange1.1g030283m.g
Citrus sinensis
orange1.1g030283m.g
I
0.435
GLYMA01G28820
Glycine max
GLYMA01G28820
I
0.435
GLYMA03G08270
Glycine max
GLYMA03G08270
I
0.435
PK14705.1
Cannabis sativa
PK14705.1
I
0.434
orange1.1g029982m.g
Citrus sinensis
orange1.1g029982m.g
I
0.434
BRADI1G29730
Brachypodium distachyon
BRADI1G29730
I
0.429
GRMZM5G834758
Zea mays
GRMZM5G834758
I
0.429
EuGene.0000010567
Micromonas pusilla
EuGene.0000010567
N
0.426
EMIHUDRAFT_434306
Emiliania huxleyi
EMIHUDRAFT_434306
N
0.426
GLYMA13G05140
Glycine max
GLYMA13G05140
I
0.425
Pavir.Ba01379
Panicum virgatum
Pavir.Ba01379
I
0.422
TCM_018380
Theobroma cacao
TCM_018380
I
0.422
Si007288m.g
Setaria italica
Si007288m.g
I
0.422
EFA82179.1
Polysphondylium pallidum
EFA82179.1
I
0.420
EuGene.0000050349
Micromonas pusilla
EuGene.0000050349
I
0.420
fgeneshDP_kg.C_scaffold_625000001
Dictyostelium purpureum
fgeneshDP_kg.C_scaffold_625000001
I
0.420
mgf012563m
Mimulus guttatus
mgf012563m
I
0.415