CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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hmg1/2
(
Ciona intestinalis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
ENSCING00000004075
T327688_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCINP00000008399
Sox
10
80
PRGRMTGYAYFVQTCREEHKRKHPNEQVVFAEFSRKCAKRWKPMTDKEKKTFTDMAEKDRQRYEREMKDYV
ENSCINP00000008399
Sox
98
166
PKRPQSAFFLFCADRRAPLKAENPGWTVGEIAKALGKKWAAASPDTKKKYAEQGEVEKSKYNKEMEKYR
Links
Other
Sox
family TFs
Other
Ciona intestinalis
TFs
263 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy