ENSCING00000018888 (Ciona intestinalis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSCING00000018888 T327700_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCINP00000032230 Sox 39 107

Links

Other Sox family TFs
Other Ciona intestinalis TFs

83 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACYPI001201 Acyrthosiphon pisum ACYPI001201 N 0.424
ACYPI002322 Acyrthosiphon pisum ACYPI002322 I 0.461
ACYPI34316 Acyrthosiphon pisum ACYPI34316 N 0.474
ENSAMEG00000008348 Ailuropoda melanoleuca ENSAMEG00000008348 I 0.415
GB41600 Apis mellifera GB41600 I 0.438
ENSAMXG00000013048 Astyanax mexicanus ENSAMXG00000013048 I 0.418
ENSP00000336856-D1 Bos grunniens ENSP00000336856-D1 I 0.415
HMG20A Bos taurus ENSBTAG00000020441 I 0.415
estExt_fgenesh2_pg.C_2300011 Branchiostoma floridae estExt_fgenesh2_pg.C_2300011 I 0.455
estExt_fgenesh2_pg.C_2300014 Branchiostoma floridae estExt_fgenesh2_pg.C_2300014 I 0.455
HMG20A Callithrix jacchus ENSCJAG00000011131 I 0.415
HMG20A Canis familiaris ENSCAFG00000018061 I 0.415
CapteG155070 Capitella teleta CapteG155070 I 0.426
HMG20A Cavia porcellus ENSCPOG00000011704 I 0.415
ENSCSAG00000014734 Chlorocebus sabaeus ENSCSAG00000014734 I 0.415
HMG20A Choloepus hoffmanni ENSCHOG00000012116 I 0.415
ENSCSAVG00000001086 Ciona savignyi ENSCSAVG00000001086 N 0.652
HMG20A Dasypus novemcinctus ENSDNOG00000034143 I 0.415
YQE_04289 Dendroctonus ponderosae YQE_04289 N 0.416
Hmg20a Dipodomys ordii ENSDORG00000000623 I 0.415
GK17179 Drosophila willistoni FBgn0219178 N 0.432
HMG20A Echinops telfairi ENSETEG00000015812 I 0.415
HMG20A Erinaceus europaeus ENSEEUG00000004472 I 0.415
HMG20A Felis catus ENSFCAG00000022539 I 0.415
hmg20a Gasterosteus aculeatus ENSGACG00000003466 I 0.418
HMG20A Gorilla gorilla ENSGGOG00000008439 I 0.415
HMG20A Homo sapiens ENSG00000140382 I 0.415
ENSSTOG00000013818 Ictidomys tridecemlineatus ENSSTOG00000013818 I 0.415
ENSLACG00000004599 Latimeria chalumnae ENSLACG00000004599 I 0.427
ENSLOCG00000014255 Lepisosteus oculatus ENSLOCG00000014255 I 0.418
LotgiG196090 Lottia gigantea LotgiG196090 I 0.485
HMG20A Loxodonta africana ENSLAFG00000018273 I 0.415
LCUP006200 Lucilia cuprina LCUP006200 N 0.425
ENSP00000371133 Macaca fascicularis ENSP00000371133 I 0.415
HMG20A Macaca mulatta ENSMMUG00000007430 I 0.415
ENSMEUG00000016429 Macropus eugenii ENSMEUG00000016429 I 0.415
MESCA003479 Megaselia scalaris MESCA003479 N 0.419
MVLG_01270 Microbotryum violaceum MVLG_01270 I 0.459
HMG20A Microcebus murinus ENSMICG00000011025 I 0.415
HMG20A Monodelphis domestica ENSMODG00000012113 I 0.415
estExt_fgeneshMC_pg.C_20910 Mucor circinelloides estExt_fgeneshMC_pg.C_20910 I 0.427
fgeneshMC_pg.3_#_1190 Mucor circinelloides fgeneshMC_pg.3_#_1190 I 0.458
ENSMPUG00000017330 Mustela putorius furo ENSMPUG00000017330 I 0.415
Hmg20a Mus musculus ENSMUSG00000032329 I 0.415
Myotis_brandtii_HMG20A_10005450 Myotis brandtii Myotis_brandtii_HMG20A_10005450 I 0.415
HMG20A Myotis lucifugus ENSMLUG00000011648 I 0.415
NEMVEDRAFT_v1g105457 Nematostella vectensis NEMVEDRAFT_v1g105457 I 0.451
ENSNLEG00000008357 Nomascus leucogenys ENSNLEG00000008357 I 0.415
Ocbimv22031259m.g Octopus bimaculoides Ocbimv22031259m.g I 0.483
ENSONIG00000012862 Oreochromis niloticus ENSONIG00000012862 I 0.418
HMG20A Ornithorhynchus anatinus ENSOANG00000009993 I 0.415
HMG20A Oryctolagus cuniculus ENSOCUG00000005648 I 0.415
hmg20a Oryzias latipes ENSORLG00000001794 I 0.418
HMG20A Otolemur garnettii ENSOGAG00000006630 I 0.415
ENSOARG00000001765 Ovis aries ENSOARG00000001765 I 0.415
HMG20A Pan troglodytes ENSPTRG00000007326 I 0.415
ENSPANG00000015844 Papio anubis ENSPANG00000015844 I 0.415
PHUM514030 Pediculus humanus PHUM514030 N 0.420
gw1.72.30.1 Phycomyces blakesleeanus gw1.72.30.1 I 0.445
ENSPFOG00000014087 Poecilia formosa ENSPFOG00000014087 I 0.418
ENSPPYG00000006683 Pongo abelii ENSPPYG00000006683 I 0.415
HMG20A Procavia capensis ENSPCAG00000013879 I 0.415
Hmg20a Rattus norvegicus ENSRNOG00000016905 I 0.415
RO3G_07013 Rhizopus oryzae RO3G_07013 I 0.427
RO3G_15755 Rhizopus oryzae RO3G_15755 I 0.461
RO3G_16060 Rhizopus oryzae RO3G_16060 I 0.488
Sakowv30033800m.g Saccoglossus kowalevskii Sakowv30033800m.g I 0.453
ENSSHAG00000012311 Sarcophilus harrisii ENSSHAG00000012311 I 0.415
SAPIO_CDS3355 Scedosporium apiospermum SAPIO_CDS3355 I 0.431
HMG20A Sorex araneus ENSSARG00000012609 I 0.415
SPU_004776 Strongylocentrotus purpuratus SPU_004776 I 0.475
SPU_018371 Strongylocentrotus purpuratus SPU_018371 I 0.475
ENSSSCG00000024002 Sus scrofa ENSSSCG00000024002 I 0.415
HMG20A Sus scrofa ENSSSCG00000001871 I 0.415
hmg20a Takifugu rubripes ENSTRUG00000016127 I 0.418
ENSTSYG00000003485 Tarsius syrichta ENSTSYG00000003485 I 0.415
hmg20a Tetraodon nigroviridis ENSTNIG00000008460 I 0.418
TriadG23407 Trichoplax adhaerens TriadG23407 I 0.436
GSTUM_00011974001 Tuber melanosporum GSTUM_00011974001 I 0.437
HMG20A Tupaia belangeri ENSTBEG00000015283 I 0.415
HMG20A Tursiops truncatus ENSTTRG00000006500 I 0.415
HMG20A Vicugna pacos ENSVPAG00000010013 I 0.415
ENSXMAG00000000587 Xiphophorus maculatus ENSXMAG00000000587 I 0.418