hmg20a (Danio rerio)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSDARG00000031198 T327848_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Hmg20b
M02487_2.00
Mus musculus
NNATTATWHWN

NWDWATAATNN
PBM
Weirauch et al.(2014)
pTH8555
0.617 0.710
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000095483 Sox 45 113
ENSDARP00000119454 Sox 53 121

Links

Other Sox family TFs
Other Danio rerio TFs

Invalid Input OrderBy

172 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action