CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HBP1
(
Homo sapiens
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
ENSG00000105856
T328060_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HBP1
M11299_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HBP1_Q2
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hbp1
M00194_2.00
Mus musculus
NNNDDNNN
NNNHHNNN
PBM
Badis et al.(2009)
Hbp1_2241
0.741
1.000
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000222574
Sox
434
501
CKRPMNAFMLFAKKYRVEYTQMYPGKDNRAISVILGDRWKKMKNEERRMYTLEAKALAEEQKRLNPDC
ENSP00000418017
Sox
426
454
CKRPMNAFMLFAKKYRVEYTQMYPGKDNR
ENSP00000418738
Sox
434
501
CKRPMNAFMLFAKKYRVEYTQMYPGKDNRAISVILGDRWKKMKNEERRMYTLEAKALAEEQKRLNPDC
ENSP00000419143
Sox
29
67
CKRPMNAFMLFAKKYRVEYTQMYPGKDNRRSLAVSPKLE
ENSP00000420500
Sox
434
501
CKRPMNAFMLFAKKYRVEYTQMYPGKDNRAISVILGDRWKKMKNEERRMYTLEAKALAEEQKRLNPDC
ENSP00000475809
Sox
74
141
CKRPMNAFMLFAKKYRVEYTQMYPGKDNRAISVILGDRWKKMKNEERRMYTLEAKALAEEQKRLNPDC
Links
Other
Sox
family TFs
Other
Homo sapiens
TFs
241 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy