BBX (Homo sapiens)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSG00000114439 T328062_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BBX
M05763_2.00		 Homo sapiens
TGAWCDNYGWTCA
TGAWCRNHGWTCA		 SELEX
Yin et al.(2017)
BBX_eDBD_HT-SELEX		 (Direct) (Direct)
BBX
M05764_2.00		 Homo sapiens
TGAACDNYGTTCA
TGAACRNHGTTCA		 SELEX
Yin et al.(2017)
BBX_eDBD_Methyl-HT-SELEX		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Bbx
M00196_2.00 		Mus musculus
TTCATTGA
TCAATGAA		 PBM
Badis et al.(2009)
Bbx_3753 		0.650 1.000
bbx
M03975_2.00 		Drosophila melanogaster
NAACAATDNCATTGTTN
NAACAATGNHATTGTTN		 SELEX
Nitta et al.(2015)
bbx_1 		0.519 0.609
Cic
M00195_2.00 		Mus musculus
NNTGCTGABN
NVTCAGCANN		 PBM
Badis et al.(2009)
Cic_3454 		0.468 0.594
cic
M06452_2.00 		Drosophila melanogaster
YYCATTSA
TSAATGRR		 B1H
Zhu et al.(2011)
cic_SANGER_5_FBgn0028386 		0.430 0.478
gei-3
M00711_2.00 		Caenorhabditis elegans
NWNWMWDN
NHWKWNWN		 PBM
Narasimhan et al.(2015)
pTH10038 		0.429 0.493
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000319974 Sox 80 148
ENSP00000385317 Sox 80 148
ENSP00000385518 Sox 80 148
ENSP00000385530 Sox 80 148
ENSP00000403806 Sox 80 148
ENSP00000403860 Sox 80 148
ENSP00000406554 Sox 80 113
ENSP00000407662 Sox 80 148
ENSP00000408297 Sox 80 144
ENSP00000408358 Sox 80 148
ENSP00000413274 Sox 80 148
ENSP00000413320 Sox 80 148
ENSP00000414673 Sox 80 148

Links

Other Sox family TFs
Other Homo sapiens TFs

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356 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action