HMG20A (Homo sapiens)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSG00000140382 T328070_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Enables identical protein binding activity. Predicted to be involved in regulation of gene expression. Predicted to act upstream of or within negative regulation of neuron differentiation; negative regulation of protein sumoylation; and negative regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hmg20b
M02487_2.00 		Mus musculus
NNATTATWHWN
NWDWATAATNN		 PBM
Weirauch et al.(2014)
pTH8555 		0.563 0.696
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000336856 Sox 103 171
ENSP00000371133 Sox 103 171
ENSP00000452864 Sox 103 162
ENSP00000453727 Sox 1 29
ENSP00000454136 Sox 103 156

Links

Other Sox family TFs
Other Homo sapiens TFs

Invalid Input OrderBy

176 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action