ENSLOCG00000005165 (Lepisosteus oculatus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSLOCG00000005165 T328274_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Bbx
M00196_2.00 		Mus musculus
TTCATTGA
TCAATGAA		 PBM
Badis et al.(2009)
Bbx_3753 		0.606 0.848
BBX
M05763_2.00 		Homo sapiens
TGAWCDNYGWTCA
TGAWCRNHGWTCA		 SELEX
Yin et al.(2017)
BBX_eDBD_HT-SELEX 		0.606 0.848
BBX
M05764_2.00 		Homo sapiens
TGAACDNYGTTCA
TGAACRNHGTTCA		 SELEX
Yin et al.(2017)
BBX_eDBD_Methyl-HT-SELEX 		0.606 0.848
bbx
M03975_2.00 		Drosophila melanogaster
NAACAATDNCATTGTTN
NAACAATGNHATTGTTN		 SELEX
Nitta et al.(2015)
bbx_1 		0.419 0.530
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLOCP00000006220 Sox 86 151

Links

Other Sox family TFs
Other Lepisosteus oculatus TFs

113 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BBX Homo sapiens ENSG00000114439 D 0.670
bbx Danio rerio ENSDARG00000012699 I 0.624
ENSSSCG00000025539 Sus scrofa ENSSSCG00000025539 I 0.624
BBX Procavia capensis ENSPCAG00000013443 I 0.606
ENSPANG00000018335 Papio anubis ENSPANG00000018335 I 0.606
ENSPPYG00000013578 Pongo abelii ENSPPYG00000013578 I 0.606
ENSPSIG00000015872 Pelodiscus sinensis ENSPSIG00000015872 I 0.606
BBX Ochotona princeps ENSOPRG00000017013 I 0.606
BBX Pan troglodytes ENSPTRG00000015187 I 0.606
BBX Otolemur garnettii ENSOGAG00000008056 I 0.606
ENSNLEG00000003524 Nomascus leucogenys ENSNLEG00000003524 I 0.606
Bbx Mus musculus ENSMUSG00000022641 D 0.606
ENSMPUG00000009907 Mustela putorius furo ENSMPUG00000009907 I 0.606
BBX Ornithorhynchus anatinus ENSOANG00000007497 I 0.606
ENSOARG00000018829 Ovis aries ENSOARG00000018829 I 0.606
BBX Pteropus vampyrus ENSPVAG00000010534 I 0.606
BBX Oryctolagus cuniculus ENSOCUG00000001686 I 0.606
BBX Monodelphis domestica ENSMODG00000001748 I 0.606
ENSSHAG00000003009 Sarcophilus harrisii ENSSHAG00000003009 I 0.606
ENSMMUP00000011518 Macaca fascicularis ENSMMUP00000011518 I 0.606
ENSBTAP00000009058-D1 Bos grunniens ENSBTAP00000009058-D1 I 0.606
Cmyd_10015225 Chelonia mydas Cmyd_10015225 I 0.606
Myotis_brandtii_BBX_10016000 Myotis brandtii Myotis_brandtii_BBX_10016000 I 0.606
Tal_R013114 Tyto alba Tal_R013114 I 0.606
XP_002932333 Xenopus tropicalis XP_002932333 I 0.606
bbx.L Xenopus laevis XB-GENE-981431 I 0.606
Alligator_sinensis_CCG019960.1 Alligator sinensis Alligator_sinensis_CCG019960.1 I 0.606
Afo_R006638 Aptenodytes forsteri Afo_R006638 I 0.606
bbx Tetraodon nigroviridis ENSTNIG00000008596 I 0.606
BBX Sus scrofa ENSSSCG00000011943 I 0.606
ENSTSYG00000000857 Tarsius syrichta ENSTSYG00000000857 I 0.606
BBX Tursiops truncatus ENSTTRG00000013182 I 0.606
Aan_R014485 Calypte anna Aan_R014485 I 0.606
BBX Vicugna pacos ENSVPAG00000007818 I 0.606
BBX Macaca mulatta ENSMMUG00000008787 I 0.606
Bbx Rattus norvegicus ENSRNOG00000001971 I 0.606
BBX Dasypus novemcinctus ENSDNOG00000013923 I 0.606
ENSCSAG00000006313 Chlorocebus sabaeus ENSCSAG00000006313 I 0.606
Bbx Dipodomys ordii ENSDORG00000008169 I 0.606
BBX Myotis lucifugus ENSMLUG00000007351 I 0.606
BBX Erinaceus europaeus ENSEEUG00000014092 I 0.606
BBX Cavia porcellus ENSCPOG00000003575 I 0.606
BBX Callithrix jacchus ENSCJAG00000004843 I 0.606
ENSAMEG00000002574 Ailuropoda melanoleuca ENSAMEG00000002574 I 0.606
ENSAPLG00000005336 Anas platyrhynchos ENSAPLG00000005336 I 0.606
BBX Bos taurus ENSBTAG00000006893 I 0.606
BBX Canis familiaris ENSCAFG00000009867 I 0.606
BBX Echinops telfairi ENSETEG00000005122 I 0.606
BBX Equus caballus ENSECAG00000023413 I 0.606
BBX Gorilla gorilla ENSGGOG00000028441 I 0.606
BBX Meleagris gallopavo ENSMGAG00000014384 I 0.606
BBX Felis catus ENSFCAG00000007296 I 0.606
ENSLACG00000001134 Latimeria chalumnae ENSLACG00000001134 I 0.606
BBX Anolis carolinensis ENSACAG00000006532 I 0.603
ENSTGUG00000013611 Taeniopygia guttata ENSTGUG00000013611 I 0.603
Ogr11041 Ophisaurus gracilis Ogr11041 I 0.603
Gfo_R002593 Geospiza fortis Gfo_R002593 I 0.603
ENSFALG00000006478 Ficedula albicollis ENSFALG00000006478 I 0.603
Brh_R008020 Buceros rhinoceros Brh_R008020 I 0.603
Pvit_02469 Pogona vitticeps Pvit_02469 I 0.603
ENSAMXG00000017656 Astyanax mexicanus ENSAMXG00000017656 I 0.599
ENSXMAG00000009457 Xiphophorus maculatus ENSXMAG00000009457 I 0.599
ENSPFOG00000000813 Poecilia formosa ENSPFOG00000000813 I 0.599
BBX Loxodonta africana ENSLAFG00000006362 I 0.599
bbx Gasterosteus aculeatus ENSGACG00000020111 I 0.599
ENSGMOG00000015829 Gadus morhua ENSGMOG00000015829 I 0.599
bbx Oryzias latipes ENSORLG00000005486 I 0.599
bbx Takifugu rubripes ENSTRUG00000003077 I 0.599
ENSONIG00000004775 Oreochromis niloticus ENSONIG00000004775 I 0.597
Sakowv30039572m.g Saccoglossus kowalevskii Sakowv30039572m.g I 0.554
BGLB009093 Biomphalaria glabrata BGLB009093 I 0.525
CapteG39110 Capitella teleta CapteG39110 I 0.498
CapteG223458 Capitella teleta CapteG223458 I 0.498
CGI_10018417 Crassostrea gigas CGI_10018417 I 0.493
LotgiG89909 Lottia gigantea LotgiG89909 I 0.493
CpipJ_CPIJ005582 Culex pipiens CpipJ_CPIJ005582 I 0.484
CPIJ005582 Culex quinquefasciatus CPIJ005582 I 0.484
AAEL011161 Aedes aegypti AAEL011161 I 0.484
LotgiG100217 Lottia gigantea LotgiG100217 I 0.471
ISCW010061 Ixodes scapularis ISCW010061 I 0.459
HMEL012996 Heliconius melpomene HMEL012996 I 0.458
BGIBMGA008274 Bombyx mori BGIBMGA008274 I 0.458
AFAF016820 Anopheles farauti AFAF016820 I 0.455
SMAR012744 Strigamia maritima SMAR012744 I 0.450
L798_02329 Zootermopsis nevadensis L798_02329 I 0.446
Ocbimv22001036m.g Octopus bimaculoides Ocbimv22001036m.g I 0.444
tetur23g01950 Tetranychus urticae tetur23g01950 I 0.439
GB48450 Apis mellifera GB48450 I 0.438
Hsal_01854--XP_624175.2_APIME Harpegnathos saltator Hsal_01854--XP_624175.2_APIME I 0.438
Cflo_04908--XP_624175.2_APIME Camponotus floridanus Cflo_04908--XP_624175.2_APIME I 0.438
SINV12425 Solenopsis invicta SINV12425 I 0.438
ASTEI00827 Anopheles stephensi ASTEI00827 I 0.434
ASTEI11145 Anopheles stephensi ASTEI11145 I 0.434
ENSLOCG00000004648 Lepisosteus oculatus ENSLOCG00000004648 I 0.433
DAPPUDRAFT_37735 Daphnia pulex DAPPUDRAFT_37735 I 0.433
NEMVEDRAFT_v1g122926 Nematostella vectensis NEMVEDRAFT_v1g122926 I 0.427
EFV48447 Trichinella spiralis EFV48447 I 0.427
TC007499 Tribolium castaneum TC007499 I 0.423
CGI_10003963 Crassostrea gigas CGI_10003963 I 0.422
ENSPMAG00000002631 Petromyzon marinus ENSPMAG00000002631 I 0.421
MDOA012813 Musca domestica MDOA012813 I 0.419
GK25081 Drosophila willistoni FBgn0227040 I 0.419
GG19727 Drosophila erecta FBgn0111928 I 0.419
GF20922 Drosophila ananassae FBgn0097927 I 0.419
GA16961 Drosophila pseudoobscura FBgn0076975 I 0.419
bbx Drosophila melanogaster FBgn0024251 D 0.419
GI21541 Drosophila mojavensis FBgn0144271 I 0.419
GM23082 Drosophila sechellia FBgn0177950 I 0.419
GJ16014 Drosophila virilis FBgn0203199 I 0.419
GE17925 Drosophila yakuba FBgn0235361 I 0.419
LDEC000948 Leptinotarsa decemlineata LDEC000948 I 0.416
YQE_06837 Dendroctonus ponderosae YQE_06837 I 0.416
L798_09303 Zootermopsis nevadensis L798_09303 I 0.415