CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSLOCG00000010224
(
Lepisosteus oculatus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
ENSLOCG00000010224
T328278_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLOCP00000012531
Sox
115
183
PKKPLTPYFRFFMEKRAKYAKIHPEMSNLDLTKILSKKYKELPEKKKLKYMQDFQEEKESFKKNMARFK
ENSLOCP00000012531
Sox
199
267
PEKPKTPQQLWYNHEKKTYMKLHPDVSQKELKEALRRQWSQLSDKKRLKWISKALELQKDYEDRMKAYL
ENSLOCP00000012531
Sox
299
362
TKPPPNGYSLYCAELMVNMKDVPSTERMVLCSKRWKTMSQREKDMFQKRCEQKKKQYEIDLQRF
ENSLOCP00000012531
Sox
461
495
KAQNAMESTWKAMEKKEKIPWIKKAAEDQKRYEVY
Links
Other
Sox
family TFs
Other
Lepisosteus oculatus
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSONIG00000014037
Oreochromis niloticus
ENSONIG00000014037
N
0.538
ENSXMAG00000012822
Xiphophorus maculatus
ENSXMAG00000012822
N
0.534
ubtfl
Danio rerio
ENSDARG00000038780
N
0.529
ubtfl
Gasterosteus aculeatus
ENSGACG00000001504
N
0.525
ubtfl
Takifugu rubripes
ENSTRUG00000009527
N
0.500
ubtfl
Tetraodon nigroviridis
ENSTNIG00000003066
N
0.483
ENSGMOG00000009475
Gadus morhua
ENSGMOG00000009475
N
0.481
ENSPMAG00000005214
Petromyzon marinus
ENSPMAG00000005214
N
0.451
1715211A
Xenopus laevis
1715211A
N
0.442
ubtf.L
Xenopus laevis
XB-GENE-6254049
N
0.433