Hmg20b (Mus musculus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSMUSG00000020232 T328494_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable four-way junction DNA binding activity. Acts upstream of or within negative regulation of protein sumoylation; positive regulation of neuron differentiation; and skeletal muscle cell differentiation. Predicted to be located in condensed nuclear chromosome and nuclear body. Predicted to be part of BRCA2-BRAF35 complex. Predicted to be active in nucleus. Is expressed in several structures, including branchial arch; central nervous system; early conceptus; foregut; and genitourinary system. Orthologous to human HMG20B (high mobility group 20B). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hmg20b
M02487_2.00		 Mus musculus
NNATTATWHWN
NWDWATAATNN		 PBM
Weirauch et al.(2014)
pTH8555		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.415 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02487_2.00 Sox 51 119

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000020454 Sox 70 138
ENSMUSP00000100960 Sox 70 138
ENSMUSP00000100961 Sox 70 138
ENSMUSP00000115459 Sox 70 138
ENSMUSP00000117322 Sox 20 88
ENSMUSP00000128807 Sox 70 138
ENSMUSP00000137861 Sox 1 36

Links

Other Sox family TFs
Other Mus musculus TFs

Invalid Input OrderBy

362 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action