Bbx (Mus musculus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSMUSG00000022641 T328495_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Bbx
M00196_2.00		 Mus musculus
TTCATTGA
TCAATGAA		 PBM
Badis et al.(2009)
Bbx_3753		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BBX
M05763_2.00 		Homo sapiens
TGAWCDNYGWTCA
TGAWCRNHGWTCA		 SELEX
Yin et al.(2017)
BBX_eDBD_HT-SELEX 		0.708 0.986
BBX
M05764_2.00 		Homo sapiens
TGAACDNYGTTCA
TGAACRNHGTTCA		 SELEX
Yin et al.(2017)
BBX_eDBD_Methyl-HT-SELEX 		0.708 0.986
bbx
M03975_2.00 		Drosophila melanogaster
NAACAATDNCATTGTTN
NAACAATGNHATTGTTN		 SELEX
Nitta et al.(2015)
bbx_1 		0.486 0.594
Cic
M00195_2.00 		Mus musculus
NNTGCTGABN
NVTCAGCANN		 PBM
Badis et al.(2009)
Cic_3454 		0.434 0.580
For this family, TFs with SR scores > 0.415 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00196_2.00 Sox 17 85

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000086821 Sox 80 148
ENSMUSP00000086826 Sox 80 148
ENSMUSP00000110121 Sox 80 148
ENSMUSP00000110132 Sox 80 148
ENSMUSP00000119238 Sox 80 148

Links

Other Sox family TFs
Other Mus musculus TFs

Invalid Input OrderBy

240 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action