HMG20A (Ochotona princeps)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSOPRG00000011000 T328751_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Hmg20b
M02487_2.00
Mus musculus
NNATTATWHWN

NWDWATAATNN
PBM
Weirauch et al.(2014)
pTH8555
0.423 0.729
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOPRP00000010040 Sox 103 152

Links

Other Sox family TFs
Other Ochotona princeps TFs

134 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
HMG20A Homo sapiens ENSG00000140382 I 0.723
ENSMMUP00000031974 Macaca fascicularis ENSMMUP00000031974 I 0.625
ENSMMUG00000028932 Macaca mulatta ENSMMUG00000028932 I 0.625
ENSMPUG00000007386 Mustela putorius furo ENSMPUG00000007386 I 0.560
HMG20A Ornithorhynchus anatinus ENSOANG00000009993 I 0.539
ENSOARG00000001765 Ovis aries ENSOARG00000001765 I 0.539
HMG20A Anolis carolinensis ENSACAG00000011520 I 0.539
ENSPPYG00000006683 Pongo abelii ENSPPYG00000006683 I 0.539
HMG20A Procavia capensis ENSPCAG00000013879 I 0.539
ENSPANG00000015844 Papio anubis ENSPANG00000015844 I 0.539
HMG20A Otolemur garnettii ENSOGAG00000006630 I 0.539
ENSNLEG00000008357 Nomascus leucogenys ENSNLEG00000008357 I 0.539
ENSMPUG00000017330 Mustela putorius furo ENSMPUG00000017330 I 0.539
HMG20A Microcebus murinus ENSMICG00000011025 I 0.539
HMG20A Meleagris gallopavo ENSMGAG00000003179 I 0.539
ENSMEUG00000016429 Macropus eugenii ENSMEUG00000016429 I 0.539
HMG20A Myotis lucifugus ENSMLUG00000011648 I 0.539
HMG20A Macaca mulatta ENSMMUG00000007430 I 0.539
HMG20A Pan troglodytes ENSPTRG00000007326 I 0.539
HMG20A Monodelphis domestica ENSMODG00000012113 I 0.539
Hmg20a Mus musculus ENSMUSG00000032329 I 0.539
ENSSHAG00000012311 Sarcophilus harrisii ENSSHAG00000012311 I 0.539
ENSP00000336856-D1 Bos grunniens ENSP00000336856-D1 I 0.539
Brh_R011859 Buceros rhinoceros Brh_R011859 I 0.539
Alligator_sinensis_CCG010545.1 Alligator sinensis Alligator_sinensis_CCG010545.1 I 0.539
Afo_R007008 Aptenodytes forsteri Afo_R007008 I 0.539
ENSP00000371133 Macaca fascicularis ENSP00000371133 I 0.539
Gfo_R004366 Geospiza fortis Gfo_R004366 I 0.539
Tal_R006697 Tyto alba Tal_R006697 I 0.539
Pvit_01997 Pogona vitticeps Pvit_01997 I 0.539
Myotis_brandtii_HMG20A_10005450 Myotis brandtii Myotis_brandtii_HMG20A_10005450 I 0.539
Aan_R011791 Calypte anna Aan_R011791 I 0.539
HMG20A Vicugna pacos ENSVPAG00000010013 I 0.539
ENSSSCG00000024002 Sus scrofa ENSSSCG00000024002 I 0.539
HMG20A Sus scrofa ENSSSCG00000001871 I 0.539
HMG20A Loxodonta africana ENSLAFG00000018273 I 0.539
ENSSTOG00000013818 Ictidomys tridecemlineatus ENSSTOG00000013818 I 0.539
HMG20A Tupaia belangeri ENSTBEG00000015283 I 0.539
HMG20A Tursiops truncatus ENSTTRG00000006500 I 0.539
ENSTSYG00000003485 Tarsius syrichta ENSTSYG00000003485 I 0.539
HMG20A Taeniopygia guttata ENSTGUG00000003690 I 0.539
Hmg20a Rattus norvegicus ENSRNOG00000016905 I 0.539
HMG20A Oryctolagus cuniculus ENSOCUG00000005648 I 0.539
Hmg20a Dipodomys ordii ENSDORG00000000623 I 0.539
ENSCSAG00000014734 Chlorocebus sabaeus ENSCSAG00000014734 I 0.539
HMG20A Erinaceus europaeus ENSEEUG00000004472 I 0.539
HMG20A Echinops telfairi ENSETEG00000015812 I 0.539
HMG20A Felis catus ENSFCAG00000022539 I 0.539
ENSFALG00000010751 Ficedula albicollis ENSFALG00000010751 I 0.539
HMG20A Cavia porcellus ENSCPOG00000011704 I 0.539
HMG20A Callithrix jacchus ENSCJAG00000011131 I 0.539
ENSAPLG00000015603 Anas platyrhynchos ENSAPLG00000015603 I 0.539
ENSAMEG00000008348 Ailuropoda melanoleuca ENSAMEG00000008348 I 0.539
HMG20A Bos taurus ENSBTAG00000020441 I 0.539
HMG20A Canis familiaris ENSCAFG00000018061 I 0.539
HMG20A Choloepus hoffmanni ENSCHOG00000012116 I 0.539
ENSGALG00000002746 Gallus gallus ENSGALG00000002746 I 0.539
HMG20A Dasypus novemcinctus ENSDNOG00000034143 I 0.539
HMG20A Gorilla gorilla ENSGGOG00000008439 I 0.539
ENSPSIG00000013006 Pelodiscus sinensis ENSPSIG00000013006 I 0.507
Cmyd_10010094 Chelonia mydas Cmyd_10010094 I 0.507
HMG20A Sorex araneus ENSSARG00000012609 I 0.499
ENSLACG00000004599 Latimeria chalumnae ENSLACG00000004599 I 0.472
ENSLOCG00000014255 Lepisosteus oculatus ENSLOCG00000014255 I 0.472
hmg20a Danio rerio ENSDARG00000031198 I 0.472
hmg20a Xenopus tropicalis XB-GENE-955353 I 0.472
hmg20a.L Xenopus laevis XB-GENE-955359 I 0.472
ENSGMOG00000015452 Gadus morhua ENSGMOG00000015452 I 0.444
hmg20a Takifugu rubripes ENSTRUG00000016127 I 0.444
hmg20a Tetraodon nigroviridis ENSTNIG00000008460 I 0.444
RPRC003655 Rhodnius prolixus RPRC003655 N 0.444
ENSXMAG00000000587 Xiphophorus maculatus ENSXMAG00000000587 I 0.444
ENSAMXG00000013048 Astyanax mexicanus ENSAMXG00000013048 I 0.444
ENSPFOG00000014087 Poecilia formosa ENSPFOG00000014087 I 0.444
hmg20a Gasterosteus aculeatus ENSGACG00000003466 I 0.444
hmg20a Oryzias latipes ENSORLG00000001794 I 0.444
ENSONIG00000012862 Oreochromis niloticus ENSONIG00000012862 I 0.444
hmg20b.S Xenopus laevis XB-GENE-17338323 I 0.429
hmg20b Xenopus tropicalis XB-GENE-5809048 I 0.429
hmg20b.L Xenopus laevis XB-GENE-5809135 I 0.429
ENSMGAG00000005096 Meleagris gallopavo ENSMGAG00000005096 N 0.425
HMG20B Canis familiaris ENSCAFG00000019215 I 0.423
estExt_fgenesh2_pg.C_2300014 Branchiostoma floridae estExt_fgenesh2_pg.C_2300014 I 0.423
Afo_R007636 Aptenodytes forsteri Afo_R007636 I 0.423
Aan_R011684 Calypte anna Aan_R011684 I 0.423
estExt_fgenesh2_pg.C_2300011 Branchiostoma floridae estExt_fgenesh2_pg.C_2300011 I 0.423
HMG20B Callithrix jacchus ENSCJAG00000003488 I 0.423
HMG20B Tursiops truncatus ENSTTRG00000008832 I 0.423
ENSAMEG00000005678 Ailuropoda melanoleuca ENSAMEG00000005678 I 0.423
Myotis_brandtii_HMG20B_10016321 Myotis brandtii Myotis_brandtii_HMG20B_10016321 I 0.423
HMG20B Loxodonta africana ENSLAFG00000007845 I 0.423
ENSAPLG00000005528 Anas platyrhynchos ENSAPLG00000005528 I 0.423
ENSAMXG00000017986 Astyanax mexicanus ENSAMXG00000017986 I 0.423
HMG20B Meleagris gallopavo ENSMGAG00000001362 I 0.423
ENSMEUG00000001270 Macropus eugenii ENSMEUG00000001270 I 0.423
Gfo_R007604 Geospiza fortis Gfo_R007604 I 0.423
Pvit_08123 Pogona vitticeps Pvit_08123 I 0.423
ENSBTAG00000047668 Bos taurus ENSBTAG00000047668 I 0.423
Cmyd_10002377 Chelonia mydas Cmyd_10002377 I 0.423
Alligator_sinensis_CCG000441.1 Alligator sinensis Alligator_sinensis_CCG000441.1 I 0.423
ENSGMOG00000011717 Gadus morhua ENSGMOG00000011717 I 0.423
ENSPANG00000010575 Papio anubis ENSPANG00000010575 I 0.423
HMG20B Otolemur garnettii ENSOGAG00000014171 I 0.423
HMG20B Gallus gallus ENSGALG00000027838 I 0.423
HMG20B Procavia capensis ENSPCAG00000010772 I 0.423
HMG20B Cavia porcellus ENSCPOG00000010777 I 0.423
HMG20B Monodelphis domestica ENSMODG00000006884 I 0.423
ENSFALG00000011609 Ficedula albicollis ENSFALG00000011609 I 0.423
ENSMPUG00000003925 Mustela putorius furo ENSMPUG00000003925 I 0.423
HMG20B Homo sapiens ENSG00000064961 I 0.423
Hmg20b Mus musculus ENSMUSG00000020232 D 0.423
HMG20B Ornithorhynchus anatinus ENSOANG00000013515 I 0.423
HMG20B Felis catus ENSFCAG00000026167 I 0.423
ENSOARG00000012318 Ovis aries ENSOARG00000012318 I 0.423
ENSPSIG00000010923 Pelodiscus sinensis ENSPSIG00000010923 I 0.423
ENSPPYG00000009378 Pongo abelii ENSPPYG00000009378 I 0.423
ENSDORG00000012598 Dipodomys ordii ENSDORG00000012598 I 0.423
ENSSTOG00000022314 Ictidomys tridecemlineatus ENSSTOG00000022314 I 0.423
ENSCSAG00000011140 Chlorocebus sabaeus ENSCSAG00000011140 I 0.423
HMG20B Taeniopygia guttata ENSTGUG00000000169 I 0.423
hmg20b Danio rerio ENSDARG00000042045 I 0.423
HMG20B Myotis lucifugus ENSMLUG00000022392 I 0.423
HMG20B Gorilla gorilla ENSGGOG00000014805 I 0.423
ENSSHAG00000007226 Sarcophilus harrisii ENSSHAG00000007226 I 0.423
Hmg20b Rattus norvegicus ENSRNOG00000020601 I 0.423
hmg20b Gasterosteus aculeatus ENSGACG00000012785 I 0.420
hmg20b Tetraodon nigroviridis ENSTNIG00000010630 I 0.420
eef2l2 Takifugu rubripes ENSTRUG00000017921 I 0.420
ENSXMAG00000012647 Xiphophorus maculatus ENSXMAG00000012647 I 0.420
ENSONIG00000004838 Oreochromis niloticus ENSONIG00000004838 I 0.420
ENSPFOG00000003017 Poecilia formosa ENSPFOG00000003017 I 0.420
hmg20b Oryzias latipes ENSORLG00000004640 I 0.420
ENSGALG00000027670 Gallus gallus ENSGALG00000027670 N 0.418
EIN_101720 Entamoeba invadens EIN_101720 N 0.417