ENSPSIG00000013006 (Pelodiscus sinensis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSPSIG00000013006 T328971_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Hmg20b
M02487_2.00
Mus musculus
NNATTATWHWN

NWDWATAATNN
PBM
Weirauch et al.(2014)
pTH8555
0.555 0.667
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPSIP00000014562 Sox 103 171

Links

Other Sox family TFs
Other Pelodiscus sinensis TFs

165 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Cmyd_10010094 Chelonia mydas Cmyd_10010094 I 0.741
Afo_R007008 Aptenodytes forsteri Afo_R007008 I 0.709
Brh_R011859 Buceros rhinoceros Brh_R011859 I 0.709
HMG20A Meleagris gallopavo ENSMGAG00000003179 I 0.709
Pvit_01997 Pogona vitticeps Pvit_01997 I 0.709
Tal_R006697 Tyto alba Tal_R006697 I 0.709
Alligator_sinensis_CCG010545.1 Alligator sinensis Alligator_sinensis_CCG010545.1 I 0.709
Aan_R011791 Calypte anna Aan_R011791 I 0.709
ENSAPLG00000015603 Anas platyrhynchos ENSAPLG00000015603 I 0.709
ENSFALG00000010751 Ficedula albicollis ENSFALG00000010751 I 0.709
HMG20A Taeniopygia guttata ENSTGUG00000003690 I 0.709
ENSGALG00000002746 Gallus gallus ENSGALG00000002746 I 0.709
HMG20A Anolis carolinensis ENSACAG00000011520 I 0.709
HMG20A Otolemur garnettii ENSOGAG00000006630 I 0.701
ENSP00000371133 Macaca fascicularis ENSP00000371133 I 0.701
ENSSHAG00000012311 Sarcophilus harrisii ENSSHAG00000012311 I 0.701
ENSOARG00000001765 Ovis aries ENSOARG00000001765 I 0.701
ENSP00000336856-D1 Bos grunniens ENSP00000336856-D1 I 0.701
HMG20A Gorilla gorilla ENSGGOG00000008439 I 0.701
HMG20A Oryctolagus cuniculus ENSOCUG00000005648 I 0.701
HMG20A Vicugna pacos ENSVPAG00000010013 I 0.701
ENSMEUG00000016429 Macropus eugenii ENSMEUG00000016429 I 0.701
HMG20A Monodelphis domestica ENSMODG00000012113 I 0.701
ENSSTOG00000013818 Ictidomys tridecemlineatus ENSSTOG00000013818 I 0.701
HMG20A Ornithorhynchus anatinus ENSOANG00000009993 I 0.701
ENSMPUG00000017330 Mustela putorius furo ENSMPUG00000017330 I 0.701
ENSNLEG00000008357 Nomascus leucogenys ENSNLEG00000008357 I 0.701
HMG20A Macaca mulatta ENSMMUG00000007430 I 0.701
HMG20A Myotis lucifugus ENSMLUG00000011648 I 0.701
ENSSSCG00000024002 Sus scrofa ENSSSCG00000024002 I 0.701
HMG20A Homo sapiens ENSG00000140382 I 0.701
HMG20A Pan troglodytes ENSPTRG00000007326 I 0.701
HMG20A Microcebus murinus ENSMICG00000011025 I 0.701
HMG20A Loxodonta africana ENSLAFG00000018273 I 0.701
Myotis_brandtii_HMG20A_10005450 Myotis brandtii Myotis_brandtii_HMG20A_10005450 I 0.701
HMG20A Canis familiaris ENSCAFG00000018061 I 0.701
HMG20A Choloepus hoffmanni ENSCHOG00000012116 I 0.701
HMG20A Callithrix jacchus ENSCJAG00000011131 I 0.701
ENSTSYG00000003485 Tarsius syrichta ENSTSYG00000003485 I 0.701
HMG20A Bos taurus ENSBTAG00000020441 I 0.701
ENSPANG00000015844 Papio anubis ENSPANG00000015844 I 0.701
HMG20A Tupaia belangeri ENSTBEG00000015283 I 0.701
HMG20A Procavia capensis ENSPCAG00000013879 I 0.701
ENSAMEG00000008348 Ailuropoda melanoleuca ENSAMEG00000008348 I 0.701
ENSPPYG00000006683 Pongo abelii ENSPPYG00000006683 I 0.701
ENSCSAG00000014734 Chlorocebus sabaeus ENSCSAG00000014734 I 0.701
HMG20A Cavia porcellus ENSCPOG00000011704 I 0.701
HMG20A Felis catus ENSFCAG00000022539 I 0.701
Hmg20a Dipodomys ordii ENSDORG00000000623 I 0.701
HMG20A Sus scrofa ENSSSCG00000001871 I 0.701
Hmg20a Mus musculus ENSMUSG00000032329 I 0.701
HMG20A Erinaceus europaeus ENSEEUG00000004472 I 0.701
HMG20A Dasypus novemcinctus ENSDNOG00000034143 I 0.701
Hmg20a Rattus norvegicus ENSRNOG00000016905 I 0.701
HMG20A Echinops telfairi ENSETEG00000015812 I 0.701
HMG20A Tursiops truncatus ENSTTRG00000006500 I 0.701
Gfo_R004366 Geospiza fortis Gfo_R004366 I 0.678
HMG20A Sorex araneus ENSSARG00000012609 I 0.660
hmg20a Danio rerio ENSDARG00000031198 I 0.642
ENSLOCG00000014255 Lepisosteus oculatus ENSLOCG00000014255 I 0.635
ENSLACG00000004599 Latimeria chalumnae ENSLACG00000004599 I 0.627
hmg20a Takifugu rubripes ENSTRUG00000016127 I 0.607
ENSONIG00000012862 Oreochromis niloticus ENSONIG00000012862 I 0.607
hmg20a Oryzias latipes ENSORLG00000001794 I 0.607
hmg20a Tetraodon nigroviridis ENSTNIG00000008460 I 0.607
ENSPFOG00000014087 Poecilia formosa ENSPFOG00000014087 I 0.607
ENSXMAG00000000587 Xiphophorus maculatus ENSXMAG00000000587 I 0.607
hmg20a Gasterosteus aculeatus ENSGACG00000003466 I 0.607
ENSGMOG00000015452 Gadus morhua ENSGMOG00000015452 I 0.607
ENSAMXG00000013048 Astyanax mexicanus ENSAMXG00000013048 I 0.607
estExt_fgenesh2_pg.C_2300014 Branchiostoma floridae estExt_fgenesh2_pg.C_2300014 I 0.603
estExt_fgenesh2_pg.C_2300011 Branchiostoma floridae estExt_fgenesh2_pg.C_2300011 I 0.603
hmg20a Xenopus tropicalis XB-GENE-955353 I 0.594
hmg20a.L Xenopus laevis XB-GENE-955359 I 0.594
NEMVEDRAFT_v1g105457 Nematostella vectensis NEMVEDRAFT_v1g105457 I 0.582
ENSOARG00000005838 Ovis aries ENSOARG00000005838 I 0.570
ENSAMXG00000017986 Astyanax mexicanus ENSAMXG00000017986 I 0.563
HMG20B Callithrix jacchus ENSCJAG00000003488 I 0.563
hmg20b Danio rerio ENSDARG00000042045 I 0.563
hmg20b Xenopus tropicalis XB-GENE-5809048 I 0.562
hmg20b.S Xenopus laevis XB-GENE-17338323 I 0.562
hmg20b.L Xenopus laevis XB-GENE-5809135 I 0.562
ENSGMOG00000011717 Gadus morhua ENSGMOG00000011717 I 0.561
Ocbimv22031259m.g Octopus bimaculoides Ocbimv22031259m.g I 0.560
ENSSTOG00000022314 Ictidomys tridecemlineatus ENSSTOG00000022314 I 0.555
Cmyd_10002377 Chelonia mydas Cmyd_10002377 I 0.555
Gfo_R007604 Geospiza fortis Gfo_R007604 I 0.555
Myotis_brandtii_HMG20B_10016321 Myotis brandtii Myotis_brandtii_HMG20B_10016321 I 0.555
Pvit_08123 Pogona vitticeps Pvit_08123 I 0.555
Alligator_sinensis_CCG000441.1 Alligator sinensis Alligator_sinensis_CCG000441.1 I 0.555
Afo_R007636 Aptenodytes forsteri Afo_R007636 I 0.555
HMG20B Tursiops truncatus ENSTTRG00000008832 I 0.555
Aan_R011684 Calypte anna Aan_R011684 I 0.555
HMG20B Taeniopygia guttata ENSTGUG00000000169 I 0.555
HMG20B Procavia capensis ENSPCAG00000010772 I 0.555
HMG20B Gorilla gorilla ENSGGOG00000014805 I 0.555
HMG20B Gallus gallus ENSGALG00000027838 I 0.555
HMG20B Homo sapiens ENSG00000064961 I 0.555
HMG20B Loxodonta africana ENSLAFG00000007845 I 0.555
ENSMEUG00000001270 Macropus eugenii ENSMEUG00000001270 I 0.555
ENSSHAG00000007226 Sarcophilus harrisii ENSSHAG00000007226 I 0.555
HMG20B Myotis lucifugus ENSMLUG00000022392 I 0.555
HMG20B Meleagris gallopavo ENSMGAG00000001362 I 0.555
HMG20B Felis catus ENSFCAG00000026167 I 0.555
ENSFALG00000011609 Ficedula albicollis ENSFALG00000011609 I 0.555
ENSBTAG00000047668 Bos taurus ENSBTAG00000047668 I 0.555
ENSAPLG00000005528 Anas platyrhynchos ENSAPLG00000005528 I 0.555
ENSAMEG00000005678 Ailuropoda melanoleuca ENSAMEG00000005678 I 0.555
HMG20B Canis familiaris ENSCAFG00000019215 I 0.555
HMG20B Cavia porcellus ENSCPOG00000010777 I 0.555
ENSDORG00000012598 Dipodomys ordii ENSDORG00000012598 I 0.555
ENSCSAG00000011140 Chlorocebus sabaeus ENSCSAG00000011140 I 0.555
ENSMPUG00000003925 Mustela putorius furo ENSMPUG00000003925 I 0.555
HMG20B Monodelphis domestica ENSMODG00000006884 I 0.555
ENSPSIG00000010923 Pelodiscus sinensis ENSPSIG00000010923 I 0.555
HMG20B Ornithorhynchus anatinus ENSOANG00000013515 I 0.555
HMG20B Otolemur garnettii ENSOGAG00000014171 I 0.555
ENSPANG00000010575 Papio anubis ENSPANG00000010575 I 0.555
ENSPPYG00000009378 Pongo abelii ENSPPYG00000009378 I 0.555
Hmg20b Mus musculus ENSMUSG00000020232 D 0.555
ENSOARG00000012318 Ovis aries ENSOARG00000012318 I 0.555
Hmg20b Rattus norvegicus ENSRNOG00000020601 I 0.555
hmg20b Oryzias latipes ENSORLG00000004640 I 0.553
eef2l2 Takifugu rubripes ENSTRUG00000017921 I 0.553
hmg20b Tetraodon nigroviridis ENSTNIG00000010630 I 0.553
ENSPFOG00000003017 Poecilia formosa ENSPFOG00000003017 I 0.553
hmg20b Gasterosteus aculeatus ENSGACG00000012785 I 0.553
ENSONIG00000004838 Oreochromis niloticus ENSONIG00000004838 I 0.553
ENSXMAG00000012647 Xiphophorus maculatus ENSXMAG00000012647 I 0.553
NEMVEDRAFT_v1g87244 Nematostella vectensis NEMVEDRAFT_v1g87244 I 0.549
TriadG23407 Trichoplax adhaerens TriadG23407 I 0.544
ENSAMEG00000010946 Ailuropoda melanoleuca ENSAMEG00000010946 I 0.541
SPU_004776 Strongylocentrotus purpuratus SPU_004776 I 0.539
SPU_018371 Strongylocentrotus purpuratus SPU_018371 I 0.539
Sakowv30033800m.g Saccoglossus kowalevskii Sakowv30033800m.g I 0.528
ENSLOCG00000010117 Lepisosteus oculatus ENSLOCG00000010117 I 0.525
LotgiG196090 Lottia gigantea LotgiG196090 I 0.525
ENSCPOG00000020879 Cavia porcellus ENSCPOG00000020879 I 0.522
L798_15457 Zootermopsis nevadensis L798_15457 I 0.510
CapteG155070 Capitella teleta CapteG155070 I 0.510
ENSLACG00000010699 Latimeria chalumnae ENSLACG00000010699 I 0.509
SMAR002604 Strigamia maritima SMAR002604 I 0.508
HMG20A Ochotona princeps ENSOPRG00000011000 I 0.507
MCINX003064 Melitaea cinxia MCINX003064 I 0.493
SMAR000790 Strigamia maritima SMAR000790 I 0.489
NV11068 Nasonia vitripennis NV11068 I 0.488
HHAL010521-PA Halyomorpha halys HHAL010521-PA I 0.482
CLEC002862 Cimex lectularius CLEC002862 I 0.479
XP_002161760.1 Hydra magnipapillata XP_002161760.1 I 0.472
XP_002158984.1 Hydra magnipapillata XP_002158984.1 I 0.472
HMEL017569 Heliconius melpomene HMEL017569 I 0.470
BGIBMGA005325 Bombyx mori BGIBMGA005325 I 0.470
GB41600 Apis mellifera GB41600 I 0.456
Hsal_13222--XP_625193.1_APIME Harpegnathos saltator Hsal_13222--XP_625193.1_APIME I 0.456
Cmyd_10009674 Chelonia mydas Cmyd_10009674 I 0.450
estExt_fgenesh2_pg.C_4800003 Branchiostoma floridae estExt_fgenesh2_pg.C_4800003 I 0.445
estExt_fgenesh2_pg.C_1350020 Branchiostoma floridae estExt_fgenesh2_pg.C_1350020 I 0.445
RPRC008043 Rhodnius prolixus RPRC008043 I 0.444
HMG20B Pteropus vampyrus ENSPVAG00000004300 I 0.437
YQE_04289 Dendroctonus ponderosae YQE_04289 N 0.427
KGM_20768 Danaus plexippus KGM_20768 N 0.424
ENSMMUP00000031974 Macaca fascicularis ENSMMUP00000031974 I 0.423
ENSMMUG00000028932 Macaca mulatta ENSMMUG00000028932 I 0.423
ENSCSAVG00000001086 Ciona savignyi ENSCSAVG00000001086 N 0.418
ACYPI002322 Acyrthosiphon pisum ACYPI002322 I 0.415