Bbx (Rattus norvegicus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSRNOG00000001971 T329026_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Bbx
M00196_2.00
Mus musculus
TTCATTGA

TCAATGAA
PBM
Badis et al.(2009)
Bbx_3753
0.741 1.000
BBX
M05763_2.00
Homo sapiens
TGAWCDNYGWTCA

TGAWCRNHGWTCA
SELEX
Yin et al.(2017)
BBX_eDBD_HT-SELEX
0.708 0.986
BBX
M05764_2.00
Homo sapiens
TGAACDNYGTTCA

TGAACRNHGTTCA
SELEX
Yin et al.(2017)
BBX_eDBD_Methyl-HT-SELEX
0.708 0.986
bbx
M03975_2.00
Drosophila melanogaster
NAACAATDNCATTGTTN

NAACAATGNHATTGTTN
SELEX
Nitta et al.(2015)
bbx_1
0.486 0.594
Cic
M00195_2.00
Mus musculus
NNTGCTGABN

NVTCAGCANN
PBM
Badis et al.(2009)
Cic_3454
0.434 0.580
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000002700 Sox 80 148
ENSRNOP00000070428 Sox 80 148

Links

Other Sox family TFs
Other Rattus norvegicus TFs

240 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACYPI004663 Acyrthosiphon pisum ACYPI004663 I 0.441
AAEL004381 Aedes aegypti AAEL004381 I 0.426
AAEL011161 Aedes aegypti AAEL011161 I 0.541
ENSAMEG00000002574 Ailuropoda melanoleuca ENSAMEG00000002574 I 0.708
Alligator_sinensis_CCG005631.1 Alligator sinensis Alligator_sinensis_CCG005631.1 I 0.434
Alligator_sinensis_CCG019960.1 Alligator sinensis Alligator_sinensis_CCG019960.1 I 0.708
ENSAPLG00000005336 Anas platyrhynchos ENSAPLG00000005336 I 0.708
BBX Anolis carolinensis ENSACAG00000006532 I 0.705
AALB003439 Anopheles albimanus AALB003439 I 0.434
AARA001217 Anopheles arabiensis AARA001217 I 0.434
AATE006341 Anopheles atroparvus AATE006341 I 0.431
ACHR006446 Anopheles christyi ACHR006446 I 0.434
ACUA015009 Anopheles culicifacies ACUA015009 I 0.434
ADAC008993 Anopheles darlingi ADAC008993 I 0.434
ADIR003322 Anopheles dirus ADIR003322 I 0.434
ADIR003385 Anopheles dirus ADIR003385 I 0.416
AEPI005675 Anopheles epiroticus AEPI005675 I 0.434
AFAF016820 Anopheles farauti AFAF016820 I 0.428
AFAF009600 Anopheles farauti AFAF009600 I 0.434
AFUN006011 Anopheles funestus AFUN006011 I 0.434
AFUN003674 Anopheles funestus AFUN003674 I 0.426
AGAP013411 Anopheles gambiae AGAP013411 I 0.434
AMAM017484 Anopheles maculatus AMAM017484 I 0.434
AMAM016153 Anopheles maculatus AMAM016153 I 0.461
AMEC010127 Anopheles melas AMEC010127 I 0.434
AMEM005678 Anopheles merus AMEM005678 I 0.434
AMIN000258 Anopheles minimus AMIN000258 I 0.436
AMIN003810 Anopheles minimus AMIN003810 I 0.434
AQUA008168 Anopheles quadriannulatus AQUA008168 I 0.434
ASTEI11145 Anopheles stephensi ASTEI11145 I 0.505
ASTEI00261 Anopheles stephensi ASTEI00261 I 0.434
ASTEI00827 Anopheles stephensi ASTEI00827 I 0.505
GB48450 Apis mellifera GB48450 I 0.504
GB43462 Apis mellifera GB43462 I 0.434
Afo_R006638 Aptenodytes forsteri Afo_R006638 I 0.708
ENSAMXG00000018358 Astyanax mexicanus ENSAMXG00000018358 I 0.434
ENSAMXG00000017656 Astyanax mexicanus ENSAMXG00000017656 I 0.701
ENSAMXG00000014362 Astyanax mexicanus ENSAMXG00000014362 I 0.426
ACEP18843 Atta cephalotes ACEP18843 I 0.434
ACEP13490 Atta cephalotes ACEP13490 I 0.436
BGLB001462 Biomphalaria glabrata BGLB001462 I 0.428
BGLB009093 Biomphalaria glabrata BGLB009093 I 0.623
BGIBMGA010263 Bombyx mori BGIBMGA010263 I 0.434
BGIBMGA008274 Bombyx mori BGIBMGA008274 I 0.524
ENSP00000160740-D1 Bos grunniens ENSP00000160740-D1 I 0.434
ENSBTAP00000009058-D1 Bos grunniens ENSBTAP00000009058-D1 I 0.708
BBX Bos taurus ENSBTAG00000006893 I 0.708
ENSBTAG00000019785 Bos taurus ENSBTAG00000019785 I 0.434
gw.46.292.1 Branchiostoma floridae gw.46.292.1 I 0.434
gw.448.64.1 Branchiostoma floridae gw.448.64.1 I 0.434
Brh_R008020 Buceros rhinoceros Brh_R008020 I 0.705
CBG00068 Caenorhabditis briggsae CBG00068 I 0.473
CRE24068 Caenorhabditis remanei CRE24068 I 0.428
BBX Callithrix jacchus ENSCJAG00000004843 I 0.708
CIC Callithrix jacchus ENSCJAG00000012847 I 0.434
Aan_R014485 Calypte anna Aan_R014485 I 0.708
Cflo_04908--XP_624175.2_APIME Camponotus floridanus Cflo_04908--XP_624175.2_APIME I 0.504
Cflo_01544--XP_624175.2_APIME Camponotus floridanus Cflo_01544--XP_624175.2_APIME I 0.434
BBX Canis familiaris ENSCAFG00000009867 I 0.708
CIC Canis familiaris ENSCAFG00000004858 I 0.434
CapteG39110 Capitella teleta CapteG39110 I 0.590
CapteG223458 Capitella teleta CapteG223458 I 0.590
CapteG39126 Capitella teleta CapteG39126 I 0.434
BBX Cavia porcellus ENSCPOG00000003575 I 0.708
ENSCPOG00000004391 Cavia porcellus ENSCPOG00000004391 I 0.434
Cmyd_10001800 Chelonia mydas Cmyd_10001800 I 0.434
Cmyd_10015225 Chelonia mydas Cmyd_10015225 I 0.708
ENSCSAG00000006313 Chlorocebus sabaeus ENSCSAG00000006313 I 0.708
CLEC003268 Cimex lectularius CLEC003268 I 0.434
csin104163 Clonorchis sinensis csin104163 I 0.441
CGI_10015746 Crassostrea gigas CGI_10015746 I 0.434
CGI_10018417 Crassostrea gigas CGI_10018417 I 0.590
CGI_10003963 Crassostrea gigas CGI_10003963 I 0.416
CpipJ_CPIJ005582 Culex pipiens CpipJ_CPIJ005582 I 0.541
CpipJ_CPIJ012202 Culex pipiens CpipJ_CPIJ012202 I 0.434
CPIJ005582 Culex quinquefasciatus CPIJ005582 I 0.541
CPIJ012202 Culex quinquefasciatus CPIJ012202 I 0.434
KGM_16941 Danaus plexippus KGM_16941 I 0.434
KGM_16790 Danaus plexippus KGM_16790 I 0.455
cica Danio rerio ENSDARG00000071150 I 0.426
bbx Danio rerio ENSDARG00000012699 I 0.708
BBX Dasypus novemcinctus ENSDNOG00000013923 I 0.708
CIC Dasypus novemcinctus ENSDNOG00000047657 I 0.434
YQE_06837 Dendroctonus ponderosae YQE_06837 I 0.516
YQE_03282 Dendroctonus ponderosae YQE_03282 I 0.426
Cic Dipodomys ordii ENSDORG00000008822 I 0.434
Bbx Dipodomys ordii ENSDORG00000008169 I 0.708
GF20922 Drosophila ananassae FBgn0097927 I 0.486
GG19727 Drosophila erecta FBgn0111928 I 0.486
bbx Drosophila melanogaster FBgn0024251 D 0.486
GI21541 Drosophila mojavensis FBgn0144271 I 0.486
GA16961 Drosophila pseudoobscura FBgn0076975 I 0.486
GM23082 Drosophila sechellia FBgn0177950 I 0.486
GJ16014 Drosophila virilis FBgn0203199 I 0.486
GK25081 Drosophila willistoni FBgn0227040 I 0.486
GE17925 Drosophila yakuba FBgn0235361 I 0.486
CIC Echinops telfairi ENSETEG00000017271 I 0.434
BBX Echinops telfairi ENSETEG00000005122 I 0.708
ECPE_0001539401 Echinostoma caproni ECPE_0001539401 I 0.477
CIC Equus caballus ENSECAG00000011342 I 0.434
BBX Equus caballus ENSECAG00000023413 I 0.708
BBX Erinaceus europaeus ENSEEUG00000014092 I 0.708
D915_09544 Fasciola hepatica D915_09544 I 0.449
BBX Felis catus ENSFCAG00000007296 I 0.708
ENSFCAG00000012737 Felis catus ENSFCAG00000012737 I 0.434
ENSFALG00000006478 Ficedula albicollis ENSFALG00000006478 I 0.705
ENSGMOG00000015829 Gadus morhua ENSGMOG00000015829 I 0.701
ENSGMOG00000005167 Gadus morhua ENSGMOG00000005167 I 0.434
GALMADRAFT_340474 Galerina marginata GALMADRAFT_340474 I 0.416
cicb Gasterosteus aculeatus ENSGACG00000009452 I 0.434
bbx Gasterosteus aculeatus ENSGACG00000020111 I 0.701
Gfo_R002593 Geospiza fortis Gfo_R002593 I 0.705
BBX Gorilla gorilla ENSGGOG00000028441 I 0.708
CIC Gorilla gorilla ENSGGOG00000000192 I 0.434
HHAL000065-PA Halyomorpha halys HHAL000065-PA I 0.428
Hsal_08911--XP_624175.2_APIME Harpegnathos saltator Hsal_08911--XP_624175.2_APIME I 0.434
Hsal_01854--XP_624175.2_APIME Harpegnathos saltator Hsal_01854--XP_624175.2_APIME I 0.504
HMEL012996 Heliconius melpomene HMEL012996 I 0.524
CIC Homo sapiens ENSG00000079432 I 0.434
BBX Homo sapiens ENSG00000114439 D 0.708
ENSSTOG00000000852 Ictidomys tridecemlineatus ENSSTOG00000000852 I 0.434
ISCW010061 Ixodes scapularis ISCW010061 I 0.525
ENSLACG00000001134 Latimeria chalumnae ENSLACG00000001134 I 0.708
ENSLACG00000002764 Latimeria chalumnae ENSLACG00000002764 I 0.434
ENSLOCG00000005165 Lepisosteus oculatus ENSLOCG00000005165 I 0.606
LDEC000948 Leptinotarsa decemlineata LDEC000948 I 0.516
LotgiG89909 Lottia gigantea LotgiG89909 I 0.590
BBX Loxodonta africana ENSLAFG00000006362 I 0.701
LCUP006498 Lucilia cuprina LCUP006498 I 0.479
LLOJ007756 Lutzomyia longipalpis LLOJ007756 I 0.434
ENSMMUP00000011518 Macaca fascicularis ENSMMUP00000011518 I 0.708
ENSP00000160740 Macaca fascicularis ENSP00000160740 I 0.434
ENSMMUG00000012174 Macaca mulatta ENSMMUG00000012174 I 0.434
BBX Macaca mulatta ENSMMUG00000008787 I 0.708
ENSMEUG00000016625 Macropus eugenii ENSMEUG00000016625 I 0.434
BBX Meleagris gallopavo ENSMGAG00000014384 I 0.708
MCINX015089 Melitaea cinxia MCINX015089 I 0.434
ENSMICG00000015176 Microcebus murinus ENSMICG00000015176 I 0.434
BBX Monodelphis domestica ENSMODG00000001748 I 0.708
MDOA012813 Musca domestica MDOA012813 I 0.486
ENSMPUG00000007557 Mustela putorius furo ENSMPUG00000007557 I 0.434
ENSMPUG00000009907 Mustela putorius furo ENSMPUG00000009907 I 0.708
Bbx Mus musculus ENSMUSG00000022641 D 0.741
Cic Mus musculus ENSMUSG00000005442 D 0.434
Myotis_brandtii_BBX_10016000 Myotis brandtii Myotis_brandtii_BBX_10016000 I 0.703
Myotis_brandtii_Cic_10007129 Myotis brandtii Myotis_brandtii_Cic_10007129 I 0.434
BBX Myotis lucifugus ENSMLUG00000007351 I 0.703
ENSMLUG00000016650 Myotis lucifugus ENSMLUG00000016650 I 0.434
NV10910 Nasonia vitripennis NV10910 I 0.434
ENSNLEG00000010614 Nomascus leucogenys ENSNLEG00000010614 I 0.434
ENSNLEG00000003524 Nomascus leucogenys ENSNLEG00000003524 I 0.708
BBX Ochotona princeps ENSOPRG00000017013 I 0.708
Ocbimv22037932m.g Octopus bimaculoides Ocbimv22037932m.g I 0.434
Ocbimv22001036m.g Octopus bimaculoides Ocbimv22001036m.g I 0.541
Ogr11041 Ophisaurus gracilis Ogr11041 I 0.705
Ogr10275 Ophisaurus gracilis Ogr10275 I 0.434
T265_01499 Opisthorchis viverrini T265_01499 I 0.441
ENSONIG00000013108 Oreochromis niloticus ENSONIG00000013108 I 0.434
ENSONIG00000004775 Oreochromis niloticus ENSONIG00000004775 I 0.699
ENSONIG00000004979 Oreochromis niloticus ENSONIG00000004979 I 0.420
BBX Ornithorhynchus anatinus ENSOANG00000007497 I 0.708
ENSOCUG00000006458 Oryctolagus cuniculus ENSOCUG00000006458 I 0.434
BBX Oryctolagus cuniculus ENSOCUG00000001686 I 0.708
cicb Oryzias latipes ENSORLG00000013259 I 0.434
cica Oryzias latipes ENSORLG00000007091 I 0.428
bbx Oryzias latipes ENSORLG00000005486 I 0.701
CIC Otolemur garnettii ENSOGAG00000003964 I 0.434
BBX Otolemur garnettii ENSOGAG00000008056 I 0.708
ENSOARG00000018829 Ovis aries ENSOARG00000018829 I 0.708
ENSOARG00000007985 Ovis aries ENSOARG00000007985 I 0.434
BBX Pan troglodytes ENSPTRG00000015187 I 0.708
CIC Pan troglodytes ENSPTRG00000011051 I 0.434
ENSPANG00000018335 Papio anubis ENSPANG00000018335 I 0.708
ENSPANG00000009039 Papio anubis ENSPANG00000009039 I 0.434
PAAG_02636 Paracoccidioides sp lutzii PAAG_02636 I 0.417
PAXRUDRAFT_130978 Paxillus rubicundulus PAXRUDRAFT_130978 I 0.495
PHUM079880 Pediculus humanus PHUM079880 I 0.434
PHUM230960 Pediculus humanus PHUM230960 I 0.439
ENSPSIG00000015872 Pelodiscus sinensis ENSPSIG00000015872 I 0.708
PISMIDRAFT_61363 Pisolithus microcarpus PISMIDRAFT_61363 I 0.460
M404DRAFT_998162 Pisolithus tinctorius M404DRAFT_998162 I 0.460
ENSPFOG00000016231 Poecilia formosa ENSPFOG00000016231 I 0.434
ENSPFOG00000000116 Poecilia formosa ENSPFOG00000000116 I 0.434
ENSPFOG00000000813 Poecilia formosa ENSPFOG00000000813 I 0.701
Pvit_02876 Pogona vitticeps Pvit_02876 I 0.434
Pvit_02469 Pogona vitticeps Pvit_02469 I 0.705
ENSPPYG00000013578 Pongo abelii ENSPPYG00000013578 I 0.708
ENSPPYG00000010041 Pongo abelii ENSPPYG00000010041 I 0.434
scaffold4-EXSNAP2012.129 Pristionchus exspectatus scaffold4-EXSNAP2012.129 I 0.421
CIC Procavia capensis ENSPCAG00000017001 I 0.428
BBX Procavia capensis ENSPCAG00000013443 I 0.708
CIC Pteropus vampyrus ENSPVAG00000016806 I 0.434
BBX Pteropus vampyrus ENSPVAG00000010534 I 0.708
Cic Rattus norvegicus ENSRNOG00000056118 I 0.434
RPRC001090 Rhodnius prolixus RPRC001090 I 0.428
Sakowv30039572m.g Saccoglossus kowalevskii Sakowv30039572m.g I 0.642
Sakowv30042695m.g Saccoglossus kowalevskii Sakowv30042695m.g I 0.434
ENSSHAG00000003009 Sarcophilus harrisii ENSSHAG00000003009 I 0.708
SCUD_0001673101 Schistosoma curassoni SCUD_0001673101 I 0.416
B_00914 Schistosoma haematobium B_00914 I 0.416
Sjc_0093980 Schistosoma japonicum Sjc_0093980 I 0.416
SCLCIDRAFT_120630 Scleroderma citrinum SCLCIDRAFT_120630 I 0.495
SBAD_0000026401 Soboliphyme baturini SBAD_0000026401 I 0.438
SINV12425 Solenopsis invicta SINV12425 I 0.504
SMAR009315 Strigamia maritima SMAR009315 I 0.434
SMAR012744 Strigamia maritima SMAR012744 I 0.450
SPU_025292 Strongylocentrotus purpuratus SPU_025292 I 0.434
SPU_023037 Strongylocentrotus purpuratus SPU_023037 I 0.416
CY34DRAFT_798812 Suillus luteus CY34DRAFT_798812 I 0.495
CIC Sus scrofa ENSSSCG00000003030 I 0.434
ENSSSCG00000025539 Sus scrofa ENSSSCG00000025539 I 0.565
BBX Sus scrofa ENSSSCG00000011943 I 0.708
ENSTGUG00000013611 Taeniopygia guttata ENSTGUG00000013611 I 0.705
CIC Takifugu rubripes ENSTRUG00000007193 I 0.434
bbx Takifugu rubripes ENSTRUG00000003077 I 0.735
ENSTSYG00000000857 Tarsius syrichta ENSTSYG00000000857 I 0.708
tetur21g00740 Tetranychus urticae tetur21g00740 I 0.426
tetur23g01950 Tetranychus urticae tetur23g01950 I 0.506
bbx Tetraodon nigroviridis ENSTNIG00000008596 I 0.708
CIC Tetraodon nigroviridis ENSTNIG00000003521 I 0.434
TC004697 Tribolium castaneum TC004697 I 0.434
TC007499 Tribolium castaneum TC007499 I 0.489
D917_02434 Trichinella nativa D917_02434 I 0.428
TVAG_344020 Trichomonas vaginalis TVAG_344020 I 0.425
TVAG_010230 Trichomonas vaginalis TVAG_010230 I 0.452
TMUE_s0223001200 Trichuris muris TMUE_s0223001200 I 0.428
D918_06270 Trichuris suis D918_06270 I 0.428
TTRE_0000098801 Trichuris trichiura TTRE_0000098801 I 0.428
CIC Tupaia belangeri ENSTBEG00000009044 I 0.434
BBX Tursiops truncatus ENSTTRG00000013182 I 0.708
CIC Tursiops truncatus ENSTTRG00000013873 I 0.434
Tal_R013114 Tyto alba Tal_R013114 I 0.708
BBX Vicugna pacos ENSVPAG00000007818 I 0.708
bbx.L Xenopus laevis XB-GENE-981431 I 0.708
XP_002932333 Xenopus tropicalis XP_002932333 I 0.708
cic Xenopus tropicalis XB-GENE-6467430 I 0.434
ENSXMAG00000009457 Xiphophorus maculatus ENSXMAG00000009457 I 0.701
L798_08623 Zootermopsis nevadensis L798_08623 I 0.428
L798_02329 Zootermopsis nevadensis L798_02329 I 0.513