AABR07009373.1 (Rattus norvegicus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSRNOG00000011429 T329034_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NCU02819
M02490_2.00
Neurospora crassa
NNHNNNNNRN

NYNNNNNDNN
PBM
Weirauch et al.(2014)
pTH9672
0.424 0.391
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000075288 Sox 56 124

Links

Other Sox family TFs
Other Rattus norvegicus TFs

81 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000015853 Ailuropoda melanoleuca ENSAMEG00000015853 I 0.000
ENSAMEG00000008160 Ailuropoda melanoleuca ENSAMEG00000008160 I 0.000
ENSAMEG00000005830 Ailuropoda melanoleuca ENSAMEG00000005830 I 0.000
Alligator_sinensis_CCG012713.1 Alligator sinensis Alligator_sinensis_CCG012713.1 I 0.000
Alligator_sinensis_CCG010046.1 Alligator sinensis Alligator_sinensis_CCG010046.1 N 0.000
Alligator_sinensis_CCG015231.1 Alligator sinensis Alligator_sinensis_CCG015231.1 I 0.000
ENSAPLG00000009645 Anas platyrhynchos ENSAPLG00000009645 I 0.000
ANCCAN_04327 Ancylostoma caninum ANCCAN_04327 N 0.000
ANCCEY_00583 Ancylostoma ceylanicum ANCCEY_00583 N 0.000
ANCDUO_24135 Ancylostoma duodenale ANCDUO_24135 N 0.000
TBX18 Anolis carolinensis ENSACAG00000003859 I 0.000
TBX15 Anolis carolinensis ENSACAG00000008131 I 0.000
AALB008493 Anopheles albimanus AALB008493 N 0.000
AALB000417 Anopheles albimanus AALB000417 N 0.000
AARA011013 Anopheles arabiensis AARA011013 N 0.000
AATE002453 Anopheles atroparvus AATE002453 N 0.000
ACHR009374 Anopheles christyi ACHR009374 N 0.000
ACHR005918 Anopheles christyi ACHR005918 N 0.000
ACUA008906 Anopheles culicifacies ACUA008906 N 0.000
ACUA018702 Anopheles culicifacies ACUA018702 N 0.000
ACUA028082 Anopheles culicifacies ACUA028082 N 0.000
ADAC010198 Anopheles darlingi ADAC010198 N 0.000
ADIR010892 Anopheles dirus ADIR010892 N 0.000
AEPI004511 Anopheles epiroticus AEPI004511 N 0.000
AEPI001845 Anopheles epiroticus AEPI001845 N 0.000
AEPI001841 Anopheles epiroticus AEPI001841 N 0.000
AFUN010567 Anopheles funestus AFUN010567 N 0.000
AFUN001004 Anopheles funestus AFUN001004 N 0.000
AGAP011712 Anopheles gambiae AGAP011712 N 0.000
AMEM014364 Anopheles merus AMEM014364 N 0.000
AMEM005938 Anopheles merus AMEM005938 N 0.000
AMIN000991 Anopheles minimus AMIN000991 N 0.000
AMIN008749 Anopheles minimus AMIN008749 N 0.000
AQUA010449 Anopheles quadriannulatus AQUA010449 N 0.000
AQUA000257 Anopheles quadriannulatus AQUA000257 N 0.000
ASTEI10438 Anopheles stephensi ASTEI10438 N 0.000
Afo_R005490 Aptenodytes forsteri Afo_R005490 I 0.000
Afo_R005342 Aptenodytes forsteri Afo_R005342 N 0.000
ENSAMXG00000004418 Astyanax mexicanus ENSAMXG00000004418 I 0.000
ENSAMXG00000013612 Astyanax mexicanus ENSAMXG00000013612 I 0.000
ENSAMXG00000005724 Astyanax mexicanus ENSAMXG00000005724 I 0.000
ACEP16054 Atta cephalotes ACEP16054 N 0.000
ACEP18777 Atta cephalotes ACEP18777 N 0.000
ACEP16128 Atta cephalotes ACEP16128 N 0.000
BGLB011455 Biomphalaria glabrata BGLB011455 N 0.000
BGLB008878 Biomphalaria glabrata BGLB008878 N 0.000
BGIBMGA012898 Bombyx mori BGIBMGA012898 N 0.000
BGIBMGA003174 Bombyx mori BGIBMGA003174 N 0.000
BGIBMGA006719 Bombyx mori BGIBMGA006719 N 0.000
ENSP00000362390-D1 Bos grunniens ENSP00000362390-D1 I 0.000
ENSP00000358437-D1 Bos grunniens ENSP00000358437-D1 I 0.000
ENSP00000358677-D1 Bos grunniens ENSP00000358677-D1 I 0.000
TBX22 Bos taurus ENSBTAG00000048060 I 0.000
TBX18 Bos taurus ENSBTAG00000018161 I 0.000
TBX15 Bos taurus ENSBTAG00000007767 I 0.000
estExt_fgenesh2_pg.C_1050030 Branchiostoma floridae estExt_fgenesh2_pg.C_1050030 I 0.000
e_gw.418.20.1 Branchiostoma floridae e_gw.418.20.1 I 0.000
Bm3498 Brugia malayi Bm3498 I 0.000
Brh_R011566 Buceros rhinoceros Brh_R011566 N 0.000
Brh_R004487 Buceros rhinoceros Brh_R004487 I 0.000
TBX15 Callithrix jacchus ENSCJAG00000005662 I 0.000
ENSCJAG00000000826 Callithrix jacchus ENSCJAG00000000826 N 0.000
TBX22 Callithrix jacchus ENSCJAG00000009617 I 0.000
TBX18 Callithrix jacchus ENSCJAG00000015218 I 0.000
Aan_R013329 Calypte anna Aan_R013329 I 0.000
Aan_R001146 Calypte anna Aan_R001146 I 0.000
Aan_R004737 Calypte anna Aan_R004737 I 0.000
Cflo_02417--XP_001121225.1_APIME Camponotus floridanus Cflo_02417--XP_001121225.1_APIME N 0.000
TBX10 Canis familiaris ENSCAFG00000011264 I 0.000
TBX18 Canis familiaris ENSCAFG00000002987 I 0.000
TBX15 Canis familiaris ENSCAFG00000009976 I 0.000
ENSCPOG00000008004 Cavia porcellus ENSCPOG00000008004 I 0.000
TBX15 Cavia porcellus ENSCPOG00000000615 I 0.000
Cmyd_10014386 Chelonia mydas Cmyd_10014386 I 0.000
Cmyd_10005629 Chelonia mydas Cmyd_10005629 I 0.000
Cmyd_10007257 Chelonia mydas Cmyd_10007257 I 0.000
ENSCSAG00000001712 Chlorocebus sabaeus ENSCSAG00000001712 I 0.000
ENSCSAG00000010713 Chlorocebus sabaeus ENSCSAG00000010713 I 0.000
ENSCSAG00000017375 Chlorocebus sabaeus ENSCSAG00000017375 I 0.000
CLEC007098 Cimex lectularius CLEC007098 N 0.000
ENSCSAVG00000000786 Ciona savignyi ENSCSAVG00000000786 I 0.000
KGM_15500 Danaus plexippus KGM_15500 N 0.000
tbx15 Danio rerio ENSDARG00000002582 I 0.000
tbx18 Danio rerio ENSDARG00000036930 I 0.000
tbx22 Danio rerio ENSDARG00000091748 I 0.000
TBX15 Dasypus novemcinctus ENSDNOG00000003930 I 0.000
TBX18 Dasypus novemcinctus ENSDNOG00000049259 I 0.000
YQE_10906 Dendroctonus ponderosae YQE_10906 N 0.000
YQE_06268 Dendroctonus ponderosae YQE_06268 N 0.000
ENSDORG00000012736 Dipodomys ordii ENSDORG00000012736 I 0.000
DME_0000818901 Dracunculus medinensis DME_0000818901 N 0.000
GF19461 Drosophila ananassae FBgn0096470 N 0.000
GG18707 Drosophila erecta FBgn0110916 N 0.000
GD16691 Drosophila simulans FBgn0188280 N 0.000
ECANG7_07880 Echinococcus canadensis ECANG7_07880 N 0.000
ENSETEG00000007920 Echinops telfairi ENSETEG00000007920 N 0.000
TBX22 Echinops telfairi ENSETEG00000006623 I 0.000
TBX18 Echinops telfairi ENSETEG00000006457 I 0.000
ECPE_0000395601 Echinostoma caproni ECPE_0000395601 N 0.000
TBX15 Equus caballus ENSECAG00000023325 I 0.000
TBX22 Equus caballus ENSECAG00000014426 I 0.000
TBX18 Equus caballus ENSECAG00000005787 I 0.000
TBX18 Erinaceus europaeus ENSEEUG00000013766 I 0.000
TBX15 Erinaceus europaeus ENSEEUG00000003919 I 0.000
D915_02167 Fasciola hepatica D915_02167 N 0.000
TBX18 Felis catus ENSFCAG00000012657 I 0.000
TBX15 Felis catus ENSFCAG00000023731 I 0.000
TBX22 Felis catus ENSFCAG00000002301 I 0.000
ENSFALG00000002783 Ficedula albicollis ENSFALG00000002783 I 0.000
ENSFALG00000005042 Ficedula albicollis ENSFALG00000005042 I 0.000
ENSGMOG00000003658 Gadus morhua ENSGMOG00000003658 I 0.000
ENSGALG00000015834 Gallus gallus ENSGALG00000015834 I 0.000
TBX22 Gallus gallus ENSGALG00000004093 I 0.000
ENSGALG00000014776 Gallus gallus ENSGALG00000014776 I 0.000
tbx18 Gasterosteus aculeatus ENSGACG00000005602 I 0.000
Gfo_R005492 Geospiza fortis Gfo_R005492 I 0.000
GPUH_0002190501 Gongylonema pulchrum GPUH_0002190501 N 0.000
TBX22 Gorilla gorilla ENSGGOG00000008990 I 0.000
TBX15 Gorilla gorilla ENSGGOG00000013468 I 0.000
TBX18 Gorilla gorilla ENSGGOG00000027982 I 0.000
HCOI01136500 Haemonchus contortus HCOI01136500 N 0.000
HHAL010563-PA Halyomorpha halys HHAL010563-PA N 0.000
Hsal_04126--XP_001122560.1_APIME Harpegnathos saltator Hsal_04126--XP_001122560.1_APIME I 0.000
Hsal_09269--XP_394607.3_APIME Harpegnathos saltator Hsal_09269--XP_394607.3_APIME N 0.000
HMEL004264 Heliconius melpomene HMEL004264 N 0.000
TBX15 Homo sapiens ENSG00000092607 D 0.000
TBX18 Homo sapiens ENSG00000112837 D 0.000
TBX22 Homo sapiens ENSG00000122145 D 0.000
ENSSTOG00000003725 Ictidomys tridecemlineatus ENSSTOG00000003725 I 0.000
ENSSTOG00000013040 Ictidomys tridecemlineatus ENSSTOG00000013040 I 0.000
ENSSTOG00000020544 Ictidomys tridecemlineatus ENSSTOG00000020544 I 0.000
ISCW019287 Ixodes scapularis ISCW019287 N 0.000
ENSLACG00000006381 Latimeria chalumnae ENSLACG00000006381 I 0.000
ENSLACG00000015964 Latimeria chalumnae ENSLACG00000015964 I 0.000
ENSLOCG00000014991 Lepisosteus oculatus ENSLOCG00000014991 I 0.000
ENSLOCG00000016254 Lepisosteus oculatus ENSLOCG00000016254 I 0.000
ENSLOCG00000011023 Lepisosteus oculatus ENSLOCG00000011023 I 0.000
LDEC010813 Leptinotarsa decemlineata LDEC010813 N 0.000
TBX18 Loxodonta africana ENSLAFG00000015009 I 0.000
TBX15 Loxodonta africana ENSLAFG00000018452 I 0.000
TBX22 Loxodonta africana ENSLAFG00000001881 I 0.000
LCUP008640 Lucilia cuprina LCUP008640 N 0.000
ENSP00000358677 Macaca fascicularis ENSP00000358677 I 0.000
ENSP00000362390 Macaca fascicularis ENSP00000362390 I 0.000
ENSP00000358437 Macaca fascicularis ENSP00000358437 I 0.000
TBX22 Macaca mulatta ENSMMUG00000009102 I 0.000
TBX15 Macaca mulatta ENSMMUG00000009257 I 0.000
TBX18 Macaca mulatta ENSMMUG00000010599 I 0.000
TBX18 Meleagris gallopavo ENSMGAG00000013715 I 0.000
TBX15 Meleagris gallopavo ENSMGAG00000014235 I 0.000
TBX22 Meleagris gallopavo ENSMGAG00000001700 I 0.000
MCINX015508 Melitaea cinxia MCINX015508 N 0.000
TBX22 Microcebus murinus ENSMICG00000009019 I 0.000
TBX18 Monodelphis domestica ENSMODG00000018361 I 0.000
TBX22 Monodelphis domestica ENSMODG00000004255 I 0.000
TBX15 Monodelphis domestica ENSMODG00000005319 I 0.000
ENSMPUG00000005346 Mustela putorius furo ENSMPUG00000005346 I 0.000
ENSMPUG00000012619 Mustela putorius furo ENSMPUG00000012619 I 0.000
ENSMPUG00000001549 Mustela putorius furo ENSMPUG00000001549 I 0.000
Tbx18 Mus musculus ENSMUSG00000032419 I 0.000
Tbx15 Mus musculus ENSMUSG00000027868 I 0.000
Tbx22 Mus musculus ENSMUSG00000031241 I 0.000
Myotis_brandtii_Tbx22_10010932 Myotis brandtii Myotis_brandtii_Tbx22_10010932 I 0.000
Myotis_brandtii_TBX18_10024963 Myotis brandtii Myotis_brandtii_TBX18_10024963 I 0.000
Myotis_brandtii_Tbx15_10011211 Myotis brandtii Myotis_brandtii_Tbx15_10011211 I 0.000
TBX22 Myotis lucifugus ENSMLUG00000016826 I 0.000
TBX15 Myotis lucifugus ENSMLUG00000002958 I 0.000
TBX18 Myotis lucifugus ENSMLUG00000011326 I 0.000
NECAME_11635 Necator americanus NECAME_11635 N 0.000
NEMVEDRAFT_v1g88753 Nematostella vectensis NEMVEDRAFT_v1g88753 I 0.000
ENSNLEG00000002116 Nomascus leucogenys ENSNLEG00000002116 I 0.000
ENSNLEG00000012797 Nomascus leucogenys ENSNLEG00000012797 I 0.000
TBX15 Ochotona princeps ENSOPRG00000004847 I 0.000
Ocbimv22013221m.g Octopus bimaculoides Ocbimv22013221m.g N 0.000
OESDEN_02780 Oesophagostomum dentatum OESDEN_02780 N 0.000
SNAPOd2T00025688001 Oikopleura dioica SNAPOd2T00025688001 N 0.000
OFLC_0001184101 Onchocerca flexuosa OFLC_0001184101 N 0.000
Ogr11253 Ophisaurus gracilis Ogr11253 N 0.000
Ogr00863 Ophisaurus gracilis Ogr00863 I 0.000
Ogr10944 Ophisaurus gracilis Ogr10944 I 0.000
Ogr03354 Ophisaurus gracilis Ogr03354 I 0.000
ENSONIG00000015685 Oreochromis niloticus ENSONIG00000015685 I 0.000
ENSONIG00000017642 Oreochromis niloticus ENSONIG00000017642 I 0.000
ENSONIG00000001051 Oreochromis niloticus ENSONIG00000001051 I 0.000
ENSOANG00000020395 Ornithorhynchus anatinus ENSOANG00000020395 I 0.000
ENSOANG00000029773 Ornithorhynchus anatinus ENSOANG00000029773 I 0.000
TBX22 Oryctolagus cuniculus ENSOCUG00000013685 I 0.000
TBX18 Oryctolagus cuniculus ENSOCUG00000002026 I 0.000
TBX15 Oryctolagus cuniculus ENSOCUG00000012320 I 0.000
TBX22 Otolemur garnettii ENSOGAG00000002759 I 0.000
TBX15 Otolemur garnettii ENSOGAG00000007282 I 0.000
TBX18 Otolemur garnettii ENSOGAG00000004300 I 0.000
ENSOARG00000000455 Ovis aries ENSOARG00000000455 I 0.000
ENSOARG00000013317 Ovis aries ENSOARG00000013317 I 0.000
ENSOARG00000020376 Ovis aries ENSOARG00000020376 I 0.000
TBX22 Pan troglodytes ENSPTRG00000022058 I 0.000
TBX18 Pan troglodytes ENSPTRG00000018390 I 0.000
TBX15 Pan troglodytes ENSPTRG00000001172 I 0.000
ENSPANG00000025094 Papio anubis ENSPANG00000025094 I 0.000
ENSPANG00000004604 Papio anubis ENSPANG00000004604 I 0.000
ENSPSIG00000013362 Pelodiscus sinensis ENSPSIG00000013362 I 0.000
ENSPSIG00000005286 Pelodiscus sinensis ENSPSIG00000005286 I 0.000
ENSPSIG00000017560 Pelodiscus sinensis ENSPSIG00000017560 I 0.000
PPAI002123 Phlebotomus papatasi PPAI002123 N 0.000
PPAI007567 Phlebotomus papatasi PPAI007567 N 0.000
ENSPFOG00000018033 Poecilia formosa ENSPFOG00000018033 I 0.000
ENSPFOG00000003081 Poecilia formosa ENSPFOG00000003081 I 0.000
ENSPFOG00000000670 Poecilia formosa ENSPFOG00000000670 I 0.000
Pvit_04496 Pogona vitticeps Pvit_04496 I 0.000
Pvit_09354 Pogona vitticeps Pvit_09354 I 0.000
Pvit_12384 Pogona vitticeps Pvit_12384 I 0.000
ENSPPYG00000000968 Pongo abelii ENSPPYG00000000968 I 0.000
ENSPPYG00000016815 Pongo abelii ENSPPYG00000016815 I 0.000
ENSPPYG00000020504 Pongo abelii ENSPPYG00000020504 I 0.000
PPA14512 Pristionchus pacificus PPA14512 N 0.000
TBX15 Procavia capensis ENSPCAG00000016333 I 0.000
ENSPCAG00000011680 Procavia capensis ENSPCAG00000011680 N 0.000
PXEA_0000704401 Protopolystoma xenopodis PXEA_0000704401 N 0.000
PXEA_0001803801 Protopolystoma xenopodis PXEA_0001803801 N 0.000
TBX22 Pteropus vampyrus ENSPVAG00000008832 I 0.000
TBX15 Pteropus vampyrus ENSPVAG00000015733 I 0.000
TBX18 Pteropus vampyrus ENSPVAG00000016771 I 0.000
Tbx22 Rattus norvegicus ENSRNOG00000002346 I 0.000
Tbx15 Rattus norvegicus ENSRNOG00000019565 I 0.000
Tbx18 Rattus norvegicus ENSRNOG00000010685 I 0.000
ENSSHAG00000012785 Sarcophilus harrisii ENSSHAG00000012785 I 0.000
ENSSHAG00000010820 Sarcophilus harrisii ENSSHAG00000010820 I 0.000
A_04261 Schistosoma haematobium A_04261 N 0.000
Smp_156650 Schistosoma mansoni Smp_156650 N 0.000
SMTD_0001100101 Schistosoma mattheei SMTD_0001100101 N 0.000
SINV20004 Solenopsis invicta SINV20004 N 0.000
SINV10951 Solenopsis invicta SINV10951 N 0.000
SINV16738 Solenopsis invicta SINV16738 N 0.000
SINV17750 Solenopsis invicta SINV17750 I 0.000
ENSSARG00000007424 Sorex araneus ENSSARG00000007424 I 0.000
SPER_0003769001 Spirometra erinaceieuropaei SPER_0003769001 N 0.000
SPER_0003779701 Spirometra erinaceieuropaei SPER_0003779701 N 0.000
SPER_0002063901 Spirometra erinaceieuropaei SPER_0002063901 N 0.000
TBX18 Sus scrofa ENSSSCG00000004290 I 0.000
TBX22 Sus scrofa ENSSSCG00000012449 I 0.000
SMUV_0000075501 Syphacia muris SMUV_0000075501 N 0.000
TsM_001062700 Taenia solium TsM_001062700 N 0.000
TBX22 Taeniopygia guttata ENSTGUG00000002573 I 0.000
TBX18 Taeniopygia guttata ENSTGUG00000012504 I 0.000
tbx15 Takifugu rubripes ENSTRUG00000003945 I 0.000
TBX22 Takifugu rubripes ENSTRUG00000010801 I 0.000
tbx18 Takifugu rubripes ENSTRUG00000001419 I 0.000
ENSTSYG00000007267 Tarsius syrichta ENSTSYG00000007267 I 0.000
TELCIR_17829 Teladorsagia circumcincta TELCIR_17829 N 0.000
tbx15 Tetraodon nigroviridis ENSTNIG00000015660 I 0.000
tbx18 Tetraodon nigroviridis ENSTNIG00000009690 I 0.000
TRE_0001207201 Trichobilharzia regenti TRE_0001207201 N 0.000
TBX18 Tupaia belangeri ENSTBEG00000007925 I 0.000
TBX22 Tupaia belangeri ENSTBEG00000010144 I 0.000
TBX18 Tursiops truncatus ENSTTRG00000005713 I 0.000
TBX22 Tursiops truncatus ENSTTRG00000014058 I 0.000
TBX15 Tursiops truncatus ENSTTRG00000011006 I 0.000
Tal_R000620 Tyto alba Tal_R000620 I 0.000
Tal_R010698 Tyto alba Tal_R010698 N 0.000
Tal_R004166 Tyto alba Tal_R004166 N 0.000
TBX18 Vicugna pacos ENSVPAG00000006869 I 0.000
TBX22 Vicugna pacos ENSVPAG00000011942 I 0.000
ENSVPAG00000010265 Vicugna pacos ENSVPAG00000010265 I 0.000
TBX5 Vicugna pacos ENSVPAG00000009445 I 0.000
tbx18 Xenopus tropicalis XB-GENE-489907 I 0.000
tbx22 Xenopus tropicalis XB-GENE-994522 I 0.000
tbx15 Xenopus tropicalis XB-GENE-483924 I 0.000
ENSXMAG00000002873 Xiphophorus maculatus ENSXMAG00000002873 N 0.000
ENSXMAG00000015062 Xiphophorus maculatus ENSXMAG00000015062 I 0.000
ENSXMAG00000010831 Xiphophorus maculatus ENSXMAG00000010831 I 0.000
ENSXMAG00000005990 Xiphophorus maculatus ENSXMAG00000005990 N 0.000
L798_01365 Zootermopsis nevadensis L798_01365 N 0.000
L798_14238 Zootermopsis nevadensis L798_14238 N 0.000