CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AABR07067274.1
(
Rattus norvegicus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
ENSRNOG00000038721
T329060_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000047552
Sox
3
59
CWKEHKKKHPDASVNLSEFSKKCSERWKTMSAKEKGKFEDMAKANKACYEREMKTYI
ENSRNOP00000047552
Sox
89
128
PKKIKGKHPGLSTGDVAKKLEKADTLKEKYETDIAAYRVK
Links
Other
Sox
family TFs
Other
Rattus norvegicus
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSPTRG00000013662
Pan troglodytes
ENSPTRG00000013662
N
0.469
ENSOARG00000005357
Ovis aries
ENSOARG00000005357
N
0.416