AABR07060165.1 (Rattus norvegicus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSRNOG00000048544 T329065_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000059333 Sox 6 79
ENSRNOP00000059333 Sox 75 132

Links

Other Sox family TFs
Other Rattus norvegicus TFs

122 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AABR07060287.1 Rattus norvegicus ENSRNOG00000049746 N 0.623
LOC108350839 Rattus norvegicus ENSRNOG00000038437 N 0.575
Hmg1l1 Rattus norvegicus ENSRNOG00000034130 N 0.553
ENSCPOG00000003985 Cavia porcellus ENSCPOG00000003985 N 0.553
HMGB1 Microcebus murinus ENSMICG00000006213 N 0.553
ENSSTOG00000000443 Ictidomys tridecemlineatus ENSSTOG00000000443 N 0.553
AC135696.1 Rattus norvegicus ENSRNOG00000058908 N 0.553
ENSECAG00000005186 Equus caballus ENSECAG00000005186 N 0.553
ENSMODG00000009238 Monodelphis domestica ENSMODG00000009238 N 0.553
ENSMMUG00000001275 Macaca mulatta ENSMMUG00000001275 N 0.553
ENSOARG00000017078 Ovis aries ENSOARG00000017078 N 0.553
ENSCJAG00000008384 Callithrix jacchus ENSCJAG00000008384 N 0.553
ENSPANG00000005029 Papio anubis ENSPANG00000005029 N 0.553
ENSPANG00000011105 Papio anubis ENSPANG00000011105 N 0.553
ENSCJAG00000008378 Callithrix jacchus ENSCJAG00000008378 N 0.549
ENSPPYG00000011668 Pongo abelii ENSPPYG00000011668 N 0.545
HMGB1 Bos taurus ENSBTAG00000014862 N 0.541
Hmg1l1 Rattus norvegicus ENSRNOG00000051482 N 0.540
Myotis_brandtii_Hmgb1_10026956 Myotis brandtii Myotis_brandtii_Hmgb1_10026956 N 0.537
ENSECAG00000003655 Equus caballus ENSECAG00000003655 N 0.535
ENSOGAG00000032240 Otolemur garnettii ENSOGAG00000032240 N 0.535
ENSOGAG00000028411 Otolemur garnettii ENSOGAG00000028411 N 0.528
LOC100911637 Rattus norvegicus ENSRNOG00000048094 N 0.525
LOC100911637 Rattus norvegicus ENSRNOG00000048471 N 0.525
ENSOARG00000011611 Ovis aries ENSOARG00000011611 N 0.523
Myotis_brandtii_Hmgb1_10003213 Myotis brandtii Myotis_brandtii_Hmgb1_10003213 N 0.523
ENSOCUG00000004133 Oryctolagus cuniculus ENSOCUG00000004133 N 0.522
ENSTBEG00000016187 Tupaia belangeri ENSTBEG00000016187 N 0.518
Hmgb1-ps3 Rattus norvegicus ENSRNOG00000032420 N 0.516
ENSCJAG00000022832 Callithrix jacchus ENSCJAG00000022832 N 0.516
ENSOGAG00000032152 Otolemur garnettii ENSOGAG00000032152 N 0.514
ENSOGAG00000034801 Otolemur garnettii ENSOGAG00000034801 N 0.514
ENSDNOG00000005537 Dasypus novemcinctus ENSDNOG00000005537 N 0.513
AAH73449 Xenopus laevis AAH73449 N 0.504
AAC59859 Xenopus laevis AAC59859 N 0.504
ENSOGAG00000033437 Otolemur garnettii ENSOGAG00000033437 N 0.503
AABR07025074.1 Rattus norvegicus ENSRNOG00000032550 N 0.502
ENSMICG00000016224 Microcebus murinus ENSMICG00000016224 N 0.501
ENSMMUG00000002662 Macaca mulatta ENSMMUG00000002662 N 0.500
ENSTBEG00000009427 Tupaia belangeri ENSTBEG00000009427 N 0.498
ENSGGOG00000025109 Gorilla gorilla ENSGGOG00000025109 N 0.495
Myotis_brandtii_Hmgb2_10018437 Myotis brandtii Myotis_brandtii_Hmgb2_10018437 N 0.489
ENSTBEG00000014925 Tupaia belangeri ENSTBEG00000014925 N 0.488
ENSOGAG00000028737 Otolemur garnettii ENSOGAG00000028737 N 0.488
RGD1563668 Rattus norvegicus ENSRNOG00000038478 N 0.486
HMGB1 Gorilla gorilla ENSGGOG00000026606 N 0.486
ENSTBEG00000012989 Tupaia belangeri ENSTBEG00000012989 N 0.484
ENSOARG00000015382 Ovis aries ENSOARG00000015382 N 0.484
ENSOARG00000010383 Ovis aries ENSOARG00000010383 N 0.484
ENSPANG00000007527 Papio anubis ENSPANG00000007527 N 0.484
ENSOARG00000015955 Ovis aries ENSOARG00000015955 N 0.484
ENSOGAG00000030563 Otolemur garnettii ENSOGAG00000030563 N 0.482
HMGB1 Monodelphis domestica ENSMODG00000004443 N 0.482
ENSPFOG00000008464 Poecilia formosa ENSPFOG00000008464 N 0.481
ENSGGOG00000007804 Gorilla gorilla ENSGGOG00000007804 N 0.480
ENSXMAG00000006844 Xiphophorus maculatus ENSXMAG00000006844 N 0.479
ENSONIG00000005505 Oreochromis niloticus ENSONIG00000005505 N 0.479
Hmgb2 Rattus norvegicus ENSRNOG00000033321 N 0.477
Hmgb2l1 Rattus norvegicus ENSRNOG00000013167 N 0.477
ENSAMXG00000014832 Astyanax mexicanus ENSAMXG00000014832 N 0.476
RGD1561694 Rattus norvegicus ENSRNOG00000029107 N 0.474
ENSMODG00000004606 Monodelphis domestica ENSMODG00000004606 N 0.474
ENSOCUG00000023449 Oryctolagus cuniculus ENSOCUG00000023449 N 0.469
ENSOCUG00000021132 Oryctolagus cuniculus ENSOCUG00000021132 N 0.469
hmgb2.S Xenopus laevis XB-GENE-1000251 N 0.469
ENSOGAG00000032147 Otolemur garnettii ENSOGAG00000032147 N 0.469
hmgb1a Danio rerio ENSDARG00000099175 N 0.468
BAA06440 Xenopus laevis BAA06440 N 0.468
ENSBTAP00000049357-D1 Bos grunniens ENSBTAP00000049357-D1 N 0.468
ENSCAFG00000023930 Canis familiaris ENSCAFG00000023930 N 0.467
ENSDNOG00000046844 Dasypus novemcinctus ENSDNOG00000046844 N 0.464
ENSGMOG00000010657 Gadus morhua ENSGMOG00000010657 N 0.463
ENSPFOG00000004533 Poecilia formosa ENSPFOG00000004533 N 0.462
ENSTBEG00000015340 Tupaia belangeri ENSTBEG00000015340 N 0.461
ENSOGAG00000029748 Otolemur garnettii ENSOGAG00000029748 N 0.459
hmgb1a Takifugu rubripes ENSTRUG00000008452 N 0.459
AABR07019870.1 Rattus norvegicus ENSRNOG00000038033 N 0.458
hmgb1b Takifugu rubripes ENSTRUG00000004822 N 0.457
ENSOGAG00000030052 Otolemur garnettii ENSOGAG00000030052 N 0.457
ENSOGAG00000027410 Otolemur garnettii ENSOGAG00000027410 N 0.456
ENSDNOG00000047452 Dasypus novemcinctus ENSDNOG00000047452 N 0.454
ENSMMUP00000039817 Macaca fascicularis ENSMMUP00000039817 N 0.452
ENSMMUP00000003419 Macaca fascicularis ENSMMUP00000003419 N 0.452
ENSMMUG00000002541 Macaca mulatta ENSMMUG00000002541 I 0.452
ENSMLUG00000028530 Myotis lucifugus ENSMLUG00000028530 N 0.452
ENSSTOG00000007009 Ictidomys tridecemlineatus ENSSTOG00000007009 N 0.451
ENSFCAG00000028961 Felis catus ENSFCAG00000028961 N 0.451
hmgb2a Danio rerio ENSDARG00000029722 N 0.449
HMGB2 Sus scrofa ENSSSCG00000009704 N 0.449
hmgb1a Tetraodon nigroviridis ENSTNIG00000009909 N 0.448
ENSOGAG00000028007 Otolemur garnettii ENSOGAG00000028007 N 0.447
ENSTBEG00000017117 Tupaia belangeri ENSTBEG00000017117 N 0.446
ENSTSYG00000003868 Tarsius syrichta ENSTSYG00000003868 N 0.446
ENSCJAG00000014214 Callithrix jacchus ENSCJAG00000014214 N 0.444
HMGB2 Macaca mulatta ENSMMUG00000020008 N 0.444
ENSOGAG00000032325 Otolemur garnettii ENSOGAG00000032325 N 0.440
ENSMPUG00000018359 Mustela putorius furo ENSMPUG00000018359 N 0.439
ENSCSAG00000013078 Chlorocebus sabaeus ENSCSAG00000013078 N 0.439
ENSCJAG00000033322 Callithrix jacchus ENSCJAG00000033322 N 0.439
LOC688583 Rattus norvegicus ENSRNOG00000050910 N 0.439
ENSSSCG00000024283 Sus scrofa ENSSSCG00000024283 N 0.439
ENSSSCG00000020770 Sus scrofa ENSSSCG00000020770 N 0.439
ENSOCUG00000027747 Oryctolagus cuniculus ENSOCUG00000027747 N 0.438
ENSMMUG00000019832 Macaca mulatta ENSMMUG00000019832 N 0.436
ENSSTOG00000012404 Ictidomys tridecemlineatus ENSSTOG00000012404 N 0.436
ENSOARG00000005357 Ovis aries ENSOARG00000005357 N 0.435
hmgb1b Gasterosteus aculeatus ENSGACG00000011447 N 0.434
ENSBTAG00000031711 Bos taurus ENSBTAG00000031711 N 0.433
ENSDNOG00000041663 Dasypus novemcinctus ENSDNOG00000041663 N 0.432
ENSTBEG00000005874 Tupaia belangeri ENSTBEG00000005874 N 0.432
ENSOGAG00000024497 Otolemur garnettii ENSOGAG00000024497 N 0.429
hmgb1a Oryzias latipes ENSORLG00000003400 N 0.429
ENSMEUG00000011289 Macropus eugenii ENSMEUG00000011289 N 0.426
ENSBTAG00000020685 Bos taurus ENSBTAG00000020685 N 0.422
ENSPANG00000010595 Papio anubis ENSPANG00000010595 N 0.420
ENSTBEG00000015758 Tupaia belangeri ENSTBEG00000015758 N 0.419
ENSAMEG00000011652 Ailuropoda melanoleuca ENSAMEG00000011652 N 0.419
HMGB3 Oryctolagus cuniculus ENSOCUG00000024959 N 0.419
ENSOGAG00000031959 Otolemur garnettii ENSOGAG00000031959 N 0.417
ENSCJAG00000007095 Callithrix jacchus ENSCJAG00000007095 N 0.416
ENSBTAP00000049034-D1 Bos grunniens ENSBTAP00000049034-D1 N 0.415
ENSBTAG00000005098 Bos taurus ENSBTAG00000005098 N 0.415