ENSSHAG00000008406 (Sarcophilus harrisii)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSSHAG00000008406 T329108_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Sox10
M00826_2.00
Mus musculus
NNNNWBAAT

ATTVWNNNN
PBM
Weirauch et al.(2013)
pTH1729
0.155 1.000
SOX10
M03491_2.00
Homo sapiens
AACAATTKCAGTGTT

AACACTGMAATTGTT
SELEX
Jolma et al.(2013)
SOX10_1
0.155 1.000
SOX10
M03492_2.00
Homo sapiens
AACAATRTKCAGTGTT

AACACTGMAYATTGTT
SELEX
Jolma et al.(2013)
SOX10_2
0.155 1.000
SOX10
M03493_2.00
Homo sapiens
ATCAATTKCAGTGAT

ATCACTGMAATTGAT
SELEX
Jolma et al.(2013)
SOX10_3
0.155 1.000
SOX10
M03494_2.00
Homo sapiens
ATGAATTKCAGTCAT

ATGACTGMAATTCAT
SELEX
Jolma et al.(2013)
SOX10_4
0.155 1.000
SOX10
M03495_2.00
Homo sapiens
TGAATGTKCAGTCA

TGACTGMACATTCA
SELEX
Jolma et al.(2013)
SOX10_5
0.155 1.000
Sox10
M03535_2.00
Mus musculus
AACAATTKCAGTGTT

AACACTGMAATTGTT
SELEX
Jolma et al.(2013)
Sox10_1
0.155 1.000
Sox10
M03536_2.00
Mus musculus
ATCAATTKCAGTGAT

ATCACTGMAATTGAT
SELEX
Jolma et al.(2013)
Sox10_2
0.155 1.000
Sox10
M03537_2.00
Mus musculus
ATGAATTDCAGTCAT

ATGACTGHAATTCAT
SELEX
Jolma et al.(2013)
Sox10_3
0.155 1.000
SOX10
M05759_2.00
Homo sapiens
AACAATRNNNYATTGTT

AACAATRNNNYATTGTT
SELEX
Yin et al.(2017)
SOX10_eDBD_HT-SELEX
0.155 1.000
SOX10
M05761_2.00
Homo sapiens
NACAATRVNNBYATTGTN

NACAATRVNNBYATTGTN
SELEX
Yin et al.(2017)
SOX10_FL_HT-SELEX
0.155 1.000
SOX10
M05891_2.00
Homo sapiens
BBCWWTGTTH

DAACAWWGVV
SMiLE-seq
Isakova et al.(2017)
SOX10
0.155 1.000
SOX10
M08165_2.00
Homo sapiens
NNVACAAAGVN

NBCTTTGTBNN
ChIP-seq
Mathelier et al.(2014)
MA0442.2
0.155 1.000
SOX10
M09387_2.00
Homo sapiens
VAADRVVNBCWTTGTN

NACAAWGVNBBYHTTB
Misc
Kulakovskiy et al.(2013)
SOX10_HUMAN.H11MO.0.B
0.155 1.000
Sox10
M09403_2.00
Mus musculus
VAADRVVNBCWTTGTN

NACAAWGVNBBYHTTB
Misc
Kulakovskiy et al.(2013)
SOX10_MOUSE.H11MO.0.B
0.155 1.000
SOX10
M11296_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SOX10_Q3
0.155 1.000
SOX10
M11297_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SOX10_Q6_01
0.155 1.000
SOX10
M11298_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SOX10_Q6
0.155 1.000
SOX10
M05760_2.00
Homo sapiens
AACAATRSNSYATTGTT

AACAATRSNSYATTGTT
SELEX
Yin et al.(2017)
SOX10_eDBD_Methyl-HT-SELEX
0.155 1.000
SOX10
M05762_2.00
Homo sapiens
NACAATRVNNBYATTGTN

NACAATRVNNBYATTGTN
SELEX
Yin et al.(2017)
SOX10_FL_Methyl-HT-SELEX
0.155 1.000
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSHAP00000009711 Sox 1 30

Links

Other Sox family TFs
Other Sarcophilus harrisii TFs

188 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
67303 Aureococcus anophagefferens 67303 N 0.548
AAEL000771 Aedes aegypti AAEL000771 N 0.606
AALB009772 Anopheles albimanus AALB009772 N 0.530
AALB009867 Anopheles albimanus AALB009867 N 0.643
Aan_R006397 Calypte anna Aan_R006397 N 0.489
AARA000825 Anopheles arabiensis AARA000825 N 0.416
AATE015714 Anopheles atroparvus AATE015714 N 0.530
AATE016483 Anopheles atroparvus AATE016483 N 0.629
ACEP10857 Atta cephalotes ACEP10857 N 0.468
ACEP25851 Atta cephalotes ACEP25851 N 0.530
ACOM022799 Anopheles coluzzii ACOM022799 N 0.643
ACOM026653 Anopheles coluzzii ACOM026653 N 0.530
ACUA008827 Anopheles culicifacies ACUA008827 N 0.638
ACUA010594 Anopheles culicifacies ACUA010594 N 0.643
ACUA012732 Anopheles culicifacies ACUA012732 N 0.606
ADIR005631 Anopheles dirus ADIR005631 N 0.567
ADIR009661 Anopheles dirus ADIR009661 N 0.530
AEPI003629 Anopheles epiroticus AEPI003629 N 0.643
AEPI007652 Anopheles epiroticus AEPI007652 N 0.635
AEPI007948 Anopheles epiroticus AEPI007948 N 0.606
Afo_R012388 Aptenodytes forsteri Afo_R012388 N 0.732
Afo_R012670 Aptenodytes forsteri Afo_R012670 N 0.540
AFUN006689 Anopheles funestus AFUN006689 N 0.682
AFUN009317 Anopheles funestus AFUN009317 N 0.606
AFUN010198 Anopheles funestus AFUN010198 N 0.643
AGAP028091 Anopheles gambiae AGAP028091 N 0.606
ALUE_0000245701 Ascaris lumbricoides ALUE_0000245701 N 0.643
ALUE_0000639901 Ascaris lumbricoides ALUE_0000639901 N 0.634
AMAM004028 Anopheles maculatus AMAM004028 N 0.682
AMAM023617 Anopheles maculatus AMAM023617 N 0.606
AMEC007393 Anopheles melas AMEC007393 N 0.682
AMEC011653 Anopheles melas AMEC011653 N 0.606
AMEM002834 Anopheles merus AMEM002834 N 0.606
AMEM007694 Anopheles merus AMEM007694 N 0.548
AMIN001220 Anopheles minimus AMIN001220 N 0.682
AMIN009302 Anopheles minimus AMIN009302 N 0.643
ANCDUO_13942 Ancylostoma duodenale ANCDUO_13942 N 0.554
AQUA001261 Anopheles quadriannulatus AQUA001261 N 0.643
AQUA005880 Anopheles quadriannulatus AQUA005880 N 0.530
ASIS001889 Anopheles sinensis ASIS001889 N 0.512
ASTEI06131 Anopheles stephensi ASTEI06131 N 0.606
ASTEI06408 Anopheles stephensi ASTEI06408 N 0.567
BBX Sorex araneus ENSSARG00000008353 N 0.477
BGIBMGA003081 Bombyx mori BGIBMGA003081 N 0.643
BGLB010902 Biomphalaria glabrata BGLB010902 N 0.613
Brh_R004116 Buceros rhinoceros Brh_R004116 N 0.443
Cla016375 Citrullus lanatus Cla016375 N 0.503
CLEC006960 Cimex lectularius CLEC006960 N 0.643
Cmyd_10006594 Chelonia mydas Cmyd_10006594 N 0.732
CPIJ012041 Culex quinquefasciatus CPIJ012041 N 0.643
CPIJ012498 Culex quinquefasciatus CPIJ012498 N 0.512
CPIJ014017 Culex quinquefasciatus CPIJ014017 N 0.682
CpipJ_CPIJ012041 Culex pipiens CpipJ_CPIJ012041 N 0.643
CpipJ_CPIJ012498 Culex pipiens CpipJ_CPIJ012498 N 0.512
CpipJ_CPIJ014017 Culex pipiens CpipJ_CPIJ014017 N 0.682
DAPPUDRAFT_113704 Daphnia pulex DAPPUDRAFT_113704 N 0.682
DDB_G0287073 Dictyostelium discoideum DDB_G0287073 N 0.516
ECPE_0001383301 Echinostoma caproni ECPE_0001383301 N 0.447
EFA85451.1 Polysphondylium pallidum EFA85451.1 N 0.441
ENSAMXG00000017231 Astyanax mexicanus ENSAMXG00000017231 I 0.640
ENSAPLG00000003216 Anas platyrhynchos ENSAPLG00000003216 N 0.732
ENSAPLG00000010204 Anas platyrhynchos ENSAPLG00000010204 N 0.671
ENSAPLG00000013168 Anas platyrhynchos ENSAPLG00000013168 I 0.741
ENSBTAP00000027633-D1 Bos grunniens ENSBTAP00000027633-D1 I 0.682
ENSCSAG00000016751 Chlorocebus sabaeus ENSCSAG00000016751 N 0.677
ENSFALG00000011068 Ficedula albicollis ENSFALG00000011068 N 0.489
ENSFCAG00000015685 Felis catus ENSFCAG00000015685 I 0.741
ENSGALG00000023601 Gallus gallus ENSGALG00000023601 N 0.416
ENSMGAG00000006624 Meleagris gallopavo ENSMGAG00000006624 N 0.671
ENSNLEG00000002693 Nomascus leucogenys ENSNLEG00000002693 N 0.525
ENSOANG00000002448 Ornithorhynchus anatinus ENSOANG00000002448 I 0.539
ENSOANG00000011188 Ornithorhynchus anatinus ENSOANG00000011188 I 0.643
ENSP00000409273 Macaca fascicularis ENSP00000409273 I 0.741
ENSPCAG00000014137 Procavia capensis ENSPCAG00000014137 N 0.455
ENSPMAG00000004519 Petromyzon marinus ENSPMAG00000004519 N 0.504
ENSPPYG00000011810 Pongo abelii ENSPPYG00000011810 I 0.155
ENSPSIG00000016857 Pelodiscus sinensis ENSPSIG00000016857 N 0.496
ENSTSYG00000001164 Tarsius syrichta ENSTSYG00000001164 I 0.696
ENSTSYG00000006321 Tarsius syrichta ENSTSYG00000006321 I 0.732
ENSTTRG00000015548 Tursiops truncatus ENSTTRG00000015548 I 0.668
ENSVPAG00000008729 Vicugna pacos ENSVPAG00000008729 N 0.483
estExt_fgeneshDP_kg.C_1020010 Dictyostelium purpureum estExt_fgeneshDP_kg.C_1020010 N 0.510
F443_09320 Phytophthora parasitica F443_09320 N 0.485
fgenesh1_pg.C_scaffold_11000031 Sporobolomyces roseus fgenesh1_pg.C_scaffold_11000031 N 0.423
fgenesh1_pm.C_scaffold_23000166 Phytophthora capsici fgenesh1_pm.C_scaffold_23000166 N 0.477
fgenesh_scip_prom.28083.3150 Phytophthora lateralis fgenesh_scip_prom.28083.3150 N 0.477
Gfo_R008143 Geospiza fortis Gfo_R008143 N 0.489
GLOINDRAFT_271935 Rhizophagus irregularis GLOINDRAFT_271935 N 0.465
GLOINDRAFT_335861 Rhizophagus irregularis GLOINDRAFT_335861 N 0.540
GLOINDRAFT_83691 Rhizophagus irregularis GLOINDRAFT_83691 N 0.423
GLOTRDRAFT_8101 Gloeophyllum trabeum GLOTRDRAFT_8101 N 0.441
GLYMA20G01570 Glycine max GLYMA20G01570 N 0.435
Gorai.005G106800 Gossypium raimondii Gorai.005G106800 N 0.498
GPLIN_000970900 Globodera pallida GPLIN_000970900 N 0.445
GPUH_0000499601 Gongylonema pulchrum GPUH_0000499601 N 0.548
Hba_21281 Heterorhabditis bacteriophora Hba_21281 N 0.453
HelroG68905 Helobdella robusta HelroG68905 N 0.510
HHAL000218-PA Halyomorpha halys HHAL000218-PA N 0.694
HHAL001293-PA Halyomorpha halys HHAL001293-PA N 0.530
HHAL001583-PA Halyomorpha halys HHAL001583-PA N 0.507
HMEL013676 Heliconius melpomene HMEL013676 N 0.653
Hmg20b Mus musculus ENSMUSG00000020232 D 0.563
HmN_000301900 Hymenolepis microstoma HmN_000301900 N 0.536
Hsal_04827--XP_001122993.1_APIME Harpegnathos saltator Hsal_04827--XP_001122993.1_APIME N 0.447
Hsal_05005--XP_001122373.1_APIME Harpegnathos saltator Hsal_05005--XP_001122373.1_APIME N 0.428
ISCW001638 Ixodes scapularis ISCW001638 N 0.653
JL09_g5343 Pichia kudriavzevii JL09_g5343 N 0.501
K443DRAFT_58201 Laccaria amethystina K443DRAFT_58201 N 0.441
L798_00185 Zootermopsis nevadensis L798_00185 N 0.579
L798_05432 Zootermopsis nevadensis L798_05432 N 0.508
L798_12046 Zootermopsis nevadensis L798_12046 N 0.643
L898_g4879 Steinernema monticolum L898_g4879 N 0.696
LACBIDRAFT_169971 Laccaria bicolor LACBIDRAFT_169971 N 0.441
LCUP001586 Lucilia cuprina LCUP001586 N 0.453
LDEC017494 Leptinotarsa decemlineata LDEC017494 N 0.643
LDEC018263 Leptinotarsa decemlineata LDEC018263 N 0.697
LDEC019307 Leptinotarsa decemlineata LDEC019307 N 0.435
LEF1 Tursiops truncatus ENSTTRG00000008109 N 0.445
LotgiG143673 Lottia gigantea LotgiG143673 N 0.723
M404DRAFT_787968 Pisolithus tinctorius M404DRAFT_787968 N 0.512
M422DRAFT_54734 Sphaerobolus stellatus M422DRAFT_54734 N 0.491
MESCA006364 Megaselia scalaris MESCA006364 N 0.525
MESCA012239 Megaselia scalaris MESCA012239 I 0.487
Minc18937 Meloidogyne incognita Minc18937 N 0.515
MPER_06248 Moniliophthora perniciosa MPER_06248 N 0.586
Myotis_brandtii_Hmgb2_10029741 Myotis brandtii Myotis_brandtii_Hmgb2_10029741 N 0.531
Myotis_brandtii_TIMM8A_10019481 Myotis brandtii Myotis_brandtii_TIMM8A_10019481 N 0.531
OESDEN_19415 Oesophagostomum dentatum OESDEN_19415 N 0.548
Ogr00751 Ophisaurus gracilis Ogr00751 I 0.732
Ogr08337 Ophisaurus gracilis Ogr08337 N 0.453
Ogr11176 Ophisaurus gracilis Ogr11176 N 0.673
Ogr13852 Ophisaurus gracilis Ogr13852 N 0.510
PEQ_0000549401 Parascaris equorum PEQ_0000549401 N 0.708
PHUM433280 Pediculus humanus PHUM433280 N 0.603
Phyra76615 Phytophthora ramorum Phyra76615 N 0.477
Physo127875 Phytophthora sojae Physo127875 N 0.477
PK00252.1 Cannabis sativa PK00252.1 N 0.582
PLEOSDRAFT_1017219 Pleurotus ostreatus PLEOSDRAFT_1017219 N 0.443
PPA11045 Pristionchus pacificus PPA11045 N 0.420
PPAI005428 Phlebotomus papatasi PPAI005428 N 0.508
PredSwiss_ASS2010_3779.1 Pneumocystis carinii PredSwiss_ASS2010_3779.1 N 0.579
PredSwiss_CON1835.1 Pneumocystis carinii PredSwiss_CON1835.1 N 0.579
PXEA_0002992801 Protopolystoma xenopodis PXEA_0002992801 N 0.439
RPRC001038 Rhodnius prolixus RPRC001038 N 0.497
SCLCIDRAFT_59496 Scleroderma citrinum SCLCIDRAFT_59496 N 0.441
SINV16572 Solenopsis invicta SINV16572 N 0.606
SINV19749 Solenopsis invicta SINV19749 N 0.582
SINV24165 Solenopsis invicta SINV24165 N 0.466
Sjc_0107520 Schistosoma japonicum Sjc_0107520 N 0.439
SMAR007058 Strigamia maritima SMAR007058 N 0.709
SMAR010125 Strigamia maritima SMAR010125 N 0.539
SMU15030186 Schmidtea mediterranea SMU15030186 N 0.455
sox-2 Caenorhabditis elegans WBGene00004949 I 0.453
SOX10 Echinops telfairi ENSETEG00000012633 I 0.739
Sox17 Mus musculus ENSMUSG00000025902 D 0.671
SOX17 Sorex araneus ENSSARG00000009573 I 0.677
SOX18 Pan troglodytes ENSPTRG00000030459 I 0.684
SOX18 Echinops telfairi ENSETEG00000001816 N 0.455
SOX18 Callithrix jacchus ENSCJAG00000022379 N 0.488
SOX18 Dasypus novemcinctus ENSDNOG00000036237 N 0.671
SOX18 Procavia capensis ENSPCAG00000015663 N 0.677
SOX2 Procavia capensis ENSPCAG00000003690 I 0.567
SOX2 Felis catus ENSFCAG00000029205 I 0.567
Sox6 Dipodomys ordii ENSDORG00000013073 N 0.483
SOX8 Echinops telfairi ENSETEG00000015470 N 0.732
SOX8 Callithrix jacchus ENSCJAG00000002684 I 0.732
SOX8 Felis catus ENSFCAG00000004219 N 0.732
SOX8 Microcebus murinus ENSMICG00000011516 I 0.732
SOX9 Echinops telfairi ENSETEG00000020237 I 0.739
SOX9 Tupaia belangeri ENSTBEG00000000175 N 0.739
SOX9 Myotis lucifugus ENSMLUG00000030312 I 0.741
SOX9 Ochotona princeps ENSOPRG00000007860 N 0.513
sox9a Tetraodon nigroviridis ENSTNIG00000001901 N 0.688
TC009856 Tribolium castaneum TC009856 N 0.606
TCF7L2 Vicugna pacos ENSVPAG00000008158 N 0.455
TcIL3000.10.440 Trypanosoma congolense TcIL3000.10.440 N 0.491
TCNE_0000669501 Toxocara canis TCNE_0000669501 N 0.454
TVAG_114290 Trichomonas vaginalis TVAG_114290 N 0.442
TVAG_390840 Trichomonas vaginalis TVAG_390840 N 0.474
UCREL1_237 Eutypa lata UCREL1_237 N 0.511
VDBG_04936 Verticillium alfalfae VDBG_04936 N 0.441
VDBG_04936 Verticillium albo atrum VDBG_04936 N 0.441
WALSEDRAFT_59420 Wallemia sebi WALSEDRAFT_59420 N 0.458
WUBG_12101 Wuchereria bancrofti WUBG_12101 N 0.561
yakG000714 Bos grunniens yakG000714 N 0.429
YQE_03817 Dendroctonus ponderosae YQE_03817 N 0.694
YQE_08562 Dendroctonus ponderosae YQE_08562 N 0.538
YQE_13041 Dendroctonus ponderosae YQE_13041 N 0.512