CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CHD5
(
Sus scrofa
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
ENSSSCG00000003366
T329128_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSSCP00000019043
Sox
73
122
TLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGSSA
Links
Other
Sox
family TFs
Other
Sus scrofa
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CHD3
Pteropus vampyrus
ENSPVAG00000016344
N
0.741
CHD5
Gallus gallus
ENSGALG00000000747
N
0.741
ENSMEUG00000005852
Macropus eugenii
ENSMEUG00000005852
N
0.741
chd3
Xenopus tropicalis
XB-GENE-1008908
N
0.722
ENSMPUG00000008872
Mustela putorius furo
ENSMPUG00000008872
N
0.675
CHD5
Macaca mulatta
ENSMMUG00000016838
N
0.671
ENSOCUG00000023865
Oryctolagus cuniculus
ENSOCUG00000023865
N
0.671
ENSTNIG00000004346
Tetraodon nigroviridis
ENSTNIG00000004346
N
0.660
chd3
Oryzias latipes
ENSORLG00000007107
N
0.653
CHD5
Echinops telfairi
ENSETEG00000004120
N
0.631
ENSAMEG00000017006
Ailuropoda melanoleuca
ENSAMEG00000017006
N
0.596
chd4b
Danio rerio
ENSDARG00000025789
N
0.579
CHD4
Ochotona princeps
ENSOPRG00000003477
N
0.524
XP_002941963
Xenopus tropicalis
XP_002941963
N
0.524
ENSSHAG00000004107
Sarcophilus harrisii
ENSSHAG00000004107
N
0.524
CHD4
Microcebus murinus
ENSMICG00000006588
N
0.524
CHD4
Echinops telfairi
ENSETEG00000005912
N
0.524
ENSMODG00000024829
Monodelphis domestica
ENSMODG00000024829
N
0.524
SINV11745
Solenopsis invicta
SINV11745
N
0.497
ACEP22065
Atta cephalotes
ACEP22065
N
0.497
LDEC009474
Leptinotarsa decemlineata
LDEC009474
N
0.487
YQE_12532
Dendroctonus ponderosae
YQE_12532
N
0.472
PLICRDRAFT_179042
Plicaturopsis crispa
PLICRDRAFT_179042
I
0.449
MAPG_04417
Magnaporthe poae
MAPG_04417
N
0.435
KGM_21779
Danaus plexippus
KGM_21779
N
0.432
ACRE_034400
Acremonium chrysogenum
ACRE_034400
N
0.424
BBA_10208
Beauveria bassiana
BBA_10208
N
0.424
MCINX004608
Melitaea cinxia
MCINX004608
N
0.421
BGIBMGA002931
Bombyx mori
BGIBMGA002931
N
0.421
BOTBODRAFT_40635
Botryobasidium botryosum
BOTBODRAFT_40635
N
0.415