ENSSSCG00000025539 (Sus scrofa)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSSSCG00000025539 T329151_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Bbx
M00196_2.00
Mus musculus
TTCATTGA

TCAATGAA
PBM
Badis et al.(2009)
Bbx_3753
0.565 0.982
BBX
M05763_2.00
Homo sapiens
TGAWCDNYGWTCA

TGAWCRNHGWTCA
SELEX
Yin et al.(2017)
BBX_eDBD_HT-SELEX
0.565 0.982
BBX
M05764_2.00
Homo sapiens
TGAACDNYGTTCA

TGAACRNHGTTCA
SELEX
Yin et al.(2017)
BBX_eDBD_Methyl-HT-SELEX
0.565 0.982
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000024291 Sox 80 136

Links

Other Sox family TFs
Other Sus scrofa TFs

115 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
bbx Danio rerio ENSDARG00000012699 I 0.741
BBX Homo sapiens ENSG00000114439 D 0.656
ENSLOCG00000005165 Lepisosteus oculatus ENSLOCG00000005165 I 0.624
BBX Otolemur garnettii ENSOGAG00000008056 I 0.565
BBX Ochotona princeps ENSOPRG00000017013 I 0.565
ENSPANG00000018335 Papio anubis ENSPANG00000018335 I 0.565
ENSPSIG00000015872 Pelodiscus sinensis ENSPSIG00000015872 I 0.565
BBX Procavia capensis ENSPCAG00000013443 I 0.565
BBX Oryctolagus cuniculus ENSOCUG00000001686 I 0.565
BBX Ornithorhynchus anatinus ENSOANG00000007497 I 0.565
BBX Monodelphis domestica ENSMODG00000001748 I 0.565
BBX Macaca mulatta ENSMMUG00000008787 I 0.565
BBX Meleagris gallopavo ENSMGAG00000014384 I 0.565
ENSMPUG00000009907 Mustela putorius furo ENSMPUG00000009907 I 0.565
Bbx Mus musculus ENSMUSG00000022641 D 0.565
BBX Pan troglodytes ENSPTRG00000015187 I 0.565
ENSNLEG00000003524 Nomascus leucogenys ENSNLEG00000003524 I 0.565
ENSOARG00000018829 Ovis aries ENSOARG00000018829 I 0.565
BBX Pteropus vampyrus ENSPVAG00000010534 I 0.565
ENSBTAP00000009058-D1 Bos grunniens ENSBTAP00000009058-D1 I 0.565
Cmyd_10015225 Chelonia mydas Cmyd_10015225 I 0.565
Alligator_sinensis_CCG019960.1 Alligator sinensis Alligator_sinensis_CCG019960.1 I 0.565
ENSMMUP00000011518 Macaca fascicularis ENSMMUP00000011518 I 0.565
Tal_R013114 Tyto alba Tal_R013114 I 0.565
XP_002932333 Xenopus tropicalis XP_002932333 I 0.565
bbx.L Xenopus laevis XB-GENE-981431 I 0.565
Afo_R006638 Aptenodytes forsteri Afo_R006638 I 0.565
Aan_R014485 Calypte anna Aan_R014485 I 0.565
BBX Sus scrofa ENSSSCG00000011943 I 0.565
ENSSHAG00000003009 Sarcophilus harrisii ENSSHAG00000003009 I 0.565
bbx Tetraodon nigroviridis ENSTNIG00000008596 I 0.565
ENSTSYG00000000857 Tarsius syrichta ENSTSYG00000000857 I 0.565
BBX Vicugna pacos ENSVPAG00000007818 I 0.565
BBX Tursiops truncatus ENSTTRG00000013182 I 0.565
Bbx Rattus norvegicus ENSRNOG00000001971 I 0.565
ENSPPYG00000013578 Pongo abelii ENSPPYG00000013578 I 0.565
ENSCSAG00000006313 Chlorocebus sabaeus ENSCSAG00000006313 I 0.565
BBX Dasypus novemcinctus ENSDNOG00000013923 I 0.565
ENSAMEG00000002574 Ailuropoda melanoleuca ENSAMEG00000002574 I 0.565
BBX Equus caballus ENSECAG00000023413 I 0.565
BBX Cavia porcellus ENSCPOG00000003575 I 0.565
BBX Callithrix jacchus ENSCJAG00000004843 I 0.565
ENSAPLG00000005336 Anas platyrhynchos ENSAPLG00000005336 I 0.565
BBX Bos taurus ENSBTAG00000006893 I 0.565
BBX Canis familiaris ENSCAFG00000009867 I 0.565
BBX Erinaceus europaeus ENSEEUG00000014092 I 0.565
Bbx Dipodomys ordii ENSDORG00000008169 I 0.565
BBX Echinops telfairi ENSETEG00000005122 I 0.565
BBX Gorilla gorilla ENSGGOG00000028441 I 0.565
ENSLACG00000001134 Latimeria chalumnae ENSLACG00000001134 I 0.565
BBX Felis catus ENSFCAG00000007296 I 0.565
ENSTGUG00000013611 Taeniopygia guttata ENSTGUG00000013611 I 0.562
Ogr11041 Ophisaurus gracilis Ogr11041 I 0.562
Brh_R008020 Buceros rhinoceros Brh_R008020 I 0.562
Pvit_02469 Pogona vitticeps Pvit_02469 I 0.562
Gfo_R002593 Geospiza fortis Gfo_R002593 I 0.562
BBX Anolis carolinensis ENSACAG00000006532 I 0.562
ENSFALG00000006478 Ficedula albicollis ENSFALG00000006478 I 0.562
Myotis_brandtii_BBX_10016000 Myotis brandtii Myotis_brandtii_BBX_10016000 I 0.560
BBX Myotis lucifugus ENSMLUG00000007351 I 0.560
BBX Loxodonta africana ENSLAFG00000006362 I 0.558
ENSXMAG00000009457 Xiphophorus maculatus ENSXMAG00000009457 I 0.558
bbx Takifugu rubripes ENSTRUG00000003077 I 0.558
ENSPFOG00000000813 Poecilia formosa ENSPFOG00000000813 I 0.558
ENSAMXG00000017656 Astyanax mexicanus ENSAMXG00000017656 I 0.558
ENSGMOG00000015829 Gadus morhua ENSGMOG00000015829 I 0.558
bbx Oryzias latipes ENSORLG00000005486 I 0.558
bbx Gasterosteus aculeatus ENSGACG00000020111 I 0.558
ENSONIG00000004775 Oreochromis niloticus ENSONIG00000004775 I 0.555
ENSLOCG00000004648 Lepisosteus oculatus ENSLOCG00000004648 I 0.546
DAPPUDRAFT_37735 Daphnia pulex DAPPUDRAFT_37735 I 0.546
EFV48447 Trichinella spiralis EFV48447 I 0.539
GL20955 Drosophila persimilis FBgn0158550 I 0.514
NEMVEDRAFT_v1g122926 Nematostella vectensis NEMVEDRAFT_v1g122926 I 0.512
HelroG148167 Helobdella robusta HelroG148167 I 0.508
Sakowv30039572m.g Saccoglossus kowalevskii Sakowv30039572m.g I 0.508
HelroG148142 Helobdella robusta HelroG148142 I 0.507
NECAME_00080 Necator americanus NECAME_00080 I 0.507
BGLB009093 Biomphalaria glabrata BGLB009093 I 0.479
LotgiG100217 Lottia gigantea LotgiG100217 I 0.473
Hsal_18129--FBpp0074818_DROME Harpegnathos saltator Hsal_18129--FBpp0074818_DROME N 0.459
AFAF016820 Anopheles farauti AFAF016820 I 0.455
TPHA_0C04350 Tetrapisispora phaffii TPHA_0C04350 N 0.453
SS1G_05340 Sclerotinia sclerotiorum SS1G_05340 N 0.450
CapteG39110 Capitella teleta CapteG39110 I 0.447
LotgiG89909 Lottia gigantea LotgiG89909 I 0.447
CapteG223458 Capitella teleta CapteG223458 I 0.447
CGI_10018417 Crassostrea gigas CGI_10018417 I 0.447
CpipJ_CPIJ005582 Culex pipiens CpipJ_CPIJ005582 I 0.446
AAEL011161 Aedes aegypti AAEL011161 I 0.446
ENSGMOG00000014613 Gadus morhua ENSGMOG00000014613 N 0.446
CPIJ005582 Culex quinquefasciatus CPIJ005582 I 0.446
BTMF_0001637101 Brugia timori BTMF_0001637101 I 0.445
ADIR004390 Anopheles dirus ADIR004390 N 0.445
AMEM012787 Anopheles merus AMEM012787 I 0.442
ACHR003239 Anopheles christyi ACHR003239 N 0.438
SPU_021407 Strongylocentrotus purpuratus SPU_021407 N 0.436
OPUNC04G19550 Oryza punctata OPUNC04G19550 N 0.434
OB04G28810 Oryza brachyantha OB04G28810 N 0.427
OBART04G21800 Oryza barthii OBART04G21800 N 0.427
BGIOSGA016928 Oryza indica BGIOSGA016928 N 0.427
ORUFI04G23400 Oryza rufipogon ORUFI04G23400 N 0.427
OS04G0564600 Oryza sativa OS04G0564600 N 0.427
ORGLA04G0188600 Oryza glaberrima ORGLA04G0188600 N 0.427
ONIVA04G20340 Oryza nivara ONIVA04G20340 N 0.427
OGLUM04G21840 Oryza glumaepatula OGLUM04G21840 N 0.427
OMERI04G18350 Oryza meridionalis OMERI04G18350 N 0.427
DDB_G0279661 Dictyostelium discoideum DDB_G0279661 N 0.423
CGI_10003963 Crassostrea gigas CGI_10003963 I 0.422
ENSPMAG00000002631 Petromyzon marinus ENSPMAG00000002631 I 0.421
HMEL012996 Heliconius melpomene HMEL012996 I 0.420
BGIBMGA008274 Bombyx mori BGIBMGA008274 I 0.420
RO3G_05566 Rhizopus oryzae RO3G_05566 N 0.419
THITE_2010224 Thielavia terrestris THITE_2010224 N 0.418
L798_09303 Zootermopsis nevadensis L798_09303 I 0.415