ENSTNIG00000002023 (Tetraodon nigroviridis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSTNIG00000002023 T329237_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hbp1
M00194_2.00 		Mus musculus
NNNDDNNN
NNNHHNNN		 PBM
Badis et al.(2009)
Hbp1_2241 		0.687 0.824
HBP1
M11299_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HBP1_Q2 		0.687 0.824
gei-3
M00711_2.00 		Caenorhabditis elegans
NWNWMWDN
NHWKWNWN		 PBM
Narasimhan et al.(2015)
pTH10038 		0.424 0.382
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000004437 Sox 434 501

Links

Other Sox family TFs
Other Tetraodon nigroviridis TFs

141 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSONIG00000011868 Oreochromis niloticus ENSONIG00000011868 I 0.712
ENSPFOG00000012271 Poecilia formosa ENSPFOG00000012271 I 0.706
ENSXMAG00000007586 Xiphophorus maculatus ENSXMAG00000007586 I 0.706
ENSORLG00000009474 Oryzias latipes ENSORLG00000009474 I 0.703
ENSLACG00000009119 Latimeria chalumnae ENSLACG00000009119 I 0.693
HBP1 Pteropus vampyrus ENSPVAG00000014543 I 0.687
HBP1 Pan troglodytes ENSPTRG00000019575 I 0.687
ENSPSIG00000012478 Pelodiscus sinensis ENSPSIG00000012478 I 0.687
Hbp1 Rattus norvegicus ENSRNOG00000008927 I 0.687
ENSSHAG00000010948 Sarcophilus harrisii ENSSHAG00000010948 I 0.687
HBP1 Tupaia belangeri ENSTBEG00000007793 I 0.687
ENSSTOG00000013846 Ictidomys tridecemlineatus ENSSTOG00000013846 I 0.687
ENSPPYG00000017898 Pongo abelii ENSPPYG00000017898 I 0.687
ENSPFOG00000003951 Poecilia formosa ENSPFOG00000003951 I 0.687
ENSONIG00000008523 Oreochromis niloticus ENSONIG00000008523 I 0.687
HBP1 Otolemur garnettii ENSOGAG00000013102 I 0.687
HBP1 Oryctolagus cuniculus ENSOCUG00000012758 I 0.687
HBP1 Ornithorhynchus anatinus ENSOANG00000003174 I 0.687
ENSPANG00000024385 Papio anubis ENSPANG00000024385 I 0.687
HBP1 Taeniopygia guttata ENSTGUG00000003100 I 0.687
HBP1 Procavia capensis ENSPCAG00000014060 I 0.687
ENSOARG00000005055 Ovis aries ENSOARG00000005055 I 0.687
hbp1 Tetraodon nigroviridis ENSTNIG00000016027 I 0.687
Myotis_brandtii_HBP1_10033916 Myotis brandtii Myotis_brandtii_HBP1_10033916 I 0.687
Gfo_R011321 Geospiza fortis Gfo_R011321 I 0.687
ENSP00000420500 Macaca fascicularis ENSP00000420500 I 0.687
Pvit_03004 Pogona vitticeps Pvit_03004 I 0.687
Tal_R010197 Tyto alba Tal_R010197 I 0.687
hbp1.L Xenopus laevis XB-GENE-950348 I 0.687
hbp1 Xenopus tropicalis XB-GENE-950343 I 0.687
hbp1.S Xenopus laevis XB-GENE-17342930 I 0.687
ENSBTAP00000044156-D1 Bos grunniens ENSBTAP00000044156-D1 I 0.687
Cmyd_10005373 Chelonia mydas Cmyd_10005373 I 0.687
HBP1 Vicugna pacos ENSVPAG00000008629 I 0.687
HBP1 Tursiops truncatus ENSTTRG00000006826 I 0.687
hbp1 Takifugu rubripes ENSTRUG00000016990 I 0.687
Aan_R000440 Calypte anna Aan_R000440 I 0.687
Afo_R001715 Aptenodytes forsteri Afo_R001715 I 0.687
Brh_R002687 Buceros rhinoceros Brh_R002687 I 0.687
Alligator_sinensis_CCG000124.1 Alligator sinensis Alligator_sinensis_CCG000124.1 I 0.687
ENSNLEG00000008761 Nomascus leucogenys ENSNLEG00000008761 I 0.687
ENSXMAG00000016455 Xiphophorus maculatus ENSXMAG00000016455 I 0.687
HBP1 Felis catus ENSFCAG00000005858 I 0.687
ENSFALG00000010259 Ficedula albicollis ENSFALG00000010259 I 0.687
HBP1 Homo sapiens ENSG00000105856 D 0.687
ENSAMEG00000013492 Ailuropoda melanoleuca ENSAMEG00000013492 I 0.687
HBP1 Gallus gallus ENSGALG00000008050 I 0.687
ENSAMXG00000017678 Astyanax mexicanus ENSAMXG00000017678 I 0.687
HBP1 Equus caballus ENSECAG00000020969 I 0.687
HBP1 Dasypus novemcinctus ENSDNOG00000004405 I 0.687
HBP1 Cavia porcellus ENSCPOG00000002375 I 0.687
HBP1 Callithrix jacchus ENSCJAG00000016260 I 0.687
ENSCSAG00000011395 Chlorocebus sabaeus ENSCSAG00000011395 I 0.687
HBP1 Canis familiaris ENSCAFG00000003939 I 0.687
hbp1 Danio rerio ENSDARG00000028517 I 0.687
HBP1 Gorilla gorilla ENSGGOG00000007788 I 0.687
ENSAPLG00000007110 Anas platyrhynchos ENSAPLG00000007110 I 0.687
HBP1 Microcebus murinus ENSMICG00000012858 I 0.687
Hbp1 Mus musculus ENSMUSG00000002996 D 0.687
HBP1 Myotis lucifugus ENSMLUG00000012425 I 0.687
HBP1 Macaca mulatta ENSMMUG00000015409 I 0.687
HBP1 Monodelphis domestica ENSMODG00000016376 I 0.687
HBP1 Anolis carolinensis ENSACAG00000015023 I 0.687
HBP1 Meleagris gallopavo ENSMGAG00000006880 I 0.687
HBP1 Bos taurus ENSBTAG00000005524 I 0.687
ENSGMOG00000013782 Gadus morhua ENSGMOG00000013782 I 0.687
HBP1 Loxodonta africana ENSLAFG00000005317 I 0.687
ENSLOCG00000015822 Lepisosteus oculatus ENSLOCG00000015822 I 0.687
ENSMPUG00000018249 Mustela putorius furo ENSMPUG00000018249 I 0.687
hbp1 Oryzias latipes ENSORLG00000004396 I 0.685
ENSTRUG00000011881 Takifugu rubripes ENSTRUG00000011881 I 0.680
ENSGACG00000019192 Gasterosteus aculeatus ENSGACG00000019192 I 0.655
SMAR013235 Strigamia maritima SMAR013235 I 0.651
ENSPMAG00000002631 Petromyzon marinus ENSPMAG00000002631 I 0.626
NEMVEDRAFT_v1g120503 Nematostella vectensis NEMVEDRAFT_v1g120503 I 0.614
XP_002155149.1 Hydra magnipapillata XP_002155149.1 I 0.611
hbp1 Gasterosteus aculeatus ENSGACG00000010054 I 0.602
e_gw.61.169.1 Branchiostoma floridae e_gw.61.169.1 I 0.598
e_gw.633.29.1 Branchiostoma floridae e_gw.633.29.1 I 0.598
CGI_10003963 Crassostrea gigas CGI_10003963 I 0.576
TriadG55419 Trichoplax adhaerens TriadG55419 I 0.574
PHUM534240 Pediculus humanus PHUM534240 I 0.549
L798_09303 Zootermopsis nevadensis L798_09303 I 0.548
DAPPUDRAFT_313324 Daphnia pulex DAPPUDRAFT_313324 I 0.516
ISCW021979 Ixodes scapularis ISCW021979 I 0.514
ML040423a Mnemiopsis leidyi ML040423a I 0.509
ECPE_0001539401 Echinostoma caproni ECPE_0001539401 I 0.471
D915_09544 Fasciola hepatica D915_09544 I 0.463
T265_01499 Opisthorchis viverrini T265_01499 I 0.461
csin104163 Clonorchis sinensis csin104163 I 0.461
SNAPOd2T00000335001 Oikopleura dioica SNAPOd2T00000335001 I 0.457
PTSG_01623 Salpingoeca rosetta PTSG_01623 I 0.455
ZYRO0C16214g Zygosaccharomyces rouxii ZYRO0C16214g I 0.447
GB51010 Apis mellifera GB51010 I 0.438
ZBAI_05541 Zygosaccharomyces bailii ZBAI_05541 I 0.435
ZBAI_00389 Zygosaccharomyces bailii ZBAI_00389 I 0.435
L892_g3879 Steinernema scapterisci L892_g3879 I 0.432
WUBG_04884 Wuchereria bancrofti WUBG_04884 I 0.432
ASU_10300 Ascaris suum ASU_10300 I 0.432
nAv.1.0.1.g00032 Acanthocheilonema viteae nAv.1.0.1.g00032 I 0.432
nLs.2.1.2.g07996 Litomosoides sigmodontis nLs.2.1.2.g07996 I 0.432
scaffold4-EXSNAP2012.129 Pristionchus exspectatus scaffold4-EXSNAP2012.129 I 0.432
TCLT_0000608401 Thelazia callipaeda TCLT_0000608401 I 0.432
OFLC_0001331401 Onchocerca flexuosa OFLC_0001331401 I 0.432
nOo.2.0.1.g00287 Onchocerca ochengi nOo.2.0.1.g00287 I 0.432
Bm5934 Brugia malayi Bm5934 I 0.432
nDi.2.2.2.g01012 Dirofilaria immitis nDi.2.2.2.g01012 I 0.432
ASIM_0000334601 Anisakis simplex ASIM_0000334601 I 0.432
LOAG_17202 Loa loa LOAG_17202 I 0.432
WBGene00241539 Onchocerca volvulus WBGene00241539 I 0.432
HelroG148167 Helobdella robusta HelroG148167 I 0.431
CBG00068 Caenorhabditis briggsae CBG00068 I 0.431
NECAME_00080 Necator americanus NECAME_00080 I 0.430
TELCIR_02356 Teladorsagia circumcincta TELCIR_02356 I 0.430
DICSQDRAFT_40774 Dichomitus squalens DICSQDRAFT_40774 I 0.430
HelroG148142 Helobdella robusta HelroG148142 I 0.430
AGOS_AAR026W Ashbya gossypii AGOS_AAR026W I 0.429
B_00914 Schistosoma haematobium B_00914 I 0.426
SCUD_0001673101 Schistosoma curassoni SCUD_0001673101 I 0.426
NEMVEDRAFT_v1g122926 Nematostella vectensis NEMVEDRAFT_v1g122926 I 0.425
CJA07419 Caenorhabditis japonica CJA07419 I 0.424
Smp_142600 Schistosoma mansoni Smp_142600 I 0.424
SVUK_0000932601 Strongylus vulgaris SVUK_0000932601 I 0.424
gei-3 Caenorhabditis elegans WBGene00001560 D 0.424
L898_g8837 Steinernema monticolum L898_g8837 I 0.424
OESDEN_00065 Oesophagostomum dentatum OESDEN_00065 I 0.424
L889_g11174 Steinernema feltiae L889_g11174 I 0.424
ANCCEY_04123 Ancylostoma ceylanicum ANCCEY_04123 I 0.424
L893_g26751 Steinernema glaseri L893_g26751 I 0.424
Sjc_0093980 Schistosoma japonicum Sjc_0093980 I 0.424
ANCCAN_00149 Ancylostoma caninum ANCCAN_00149 I 0.424
Hba_18941 Heterorhabditis bacteriophora Hba_18941 I 0.424
CBN17413 Caenorhabditis brenneri CBN17413 I 0.424
L596_g5739 Steinernema carpocapsae L596_g5739 I 0.424
ANCDUO_05529 Ancylostoma duodenale ANCDUO_05529 I 0.424
Ocbimv22001036m.g Octopus bimaculoides Ocbimv22001036m.g I 0.421
Ecym_1257 Eremothecium cymbalariae Ecym_1257 I 0.420
AACERI_AaceriAAR026W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAAR026W I 0.420
AMEC018835 Anopheles melas AMEC018835 I 0.416
GSTUM_00001090001 Tuber melanosporum GSTUM_00001090001 I 0.415
L798_04766 Zootermopsis nevadensis L798_04766 I 0.415