ENSTNIG00000002023 (Tetraodon nigroviridis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSTNIG00000002023 T329237_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Hbp1
M00194_2.00
Mus musculus
NNNDDNNN

NNNHHNNN
PBM
Badis et al.(2009)
Hbp1_2241
0.687 0.824
HBP1
M11299_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HBP1_Q2
0.687 0.824
gei-3
M00711_2.00
Caenorhabditis elegans
NWNWMWDN

NHWKWNWN
PBM
Narasimhan et al.(2015)
pTH10038
0.424 0.382
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000004437 Sox 434 501

Links

Other Sox family TFs
Other Tetraodon nigroviridis TFs

Invalid Input OrderBy

141 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action