CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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pbrm1l
(
Tetraodon nigroviridis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
ENSTNIG00000014731
T329277_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTNIP00000000020
Sox
1355
1423
RKMNMSGYILFSSEMRAVIKARHPDFSFGELSRLVGTEWRNLEASKKTEYEERAAKIVEQQERERPSQK
ENSTNIP00000017767
Sox
1354
1410
RKMNMSGYILFSSEMRAVIKARHPDFSFGELSRLVGTEWRNLEASKKTEYEGMMGAY
Links
Other
Sox
family TFs
Other
Tetraodon nigroviridis
TFs
78 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy