tcf7l1b (Takifugu rubripes)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSTRUG00000001134 T329289_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Tcf7l2
M00198_2.00
Mus musculus
NSWTCAAAVN

NBTTTGAWSN
PBM
Badis et al.(2009)
Tcf7l2_3461
0.741 0.971
Tcf7l2
M02646_2.00
Mus musculus
SATCAAAGN

NCTTTGATS
SELEX
Hallikas et al.(2006)
Tcf4
0.741 0.971
TCF7L2
M08167_2.00
Homo sapiens
NVASWTCAAAGVVN

NBBCTTTGAWSTBN
ChIP-seq
Mathelier et al.(2014)
MA0523.1
0.741 0.971
TCF7L2
M09393_2.00
Homo sapiens
DGCAGSTGKS

SMCASCTGCH
Misc
Kulakovskiy et al.(2013)
ITF2_HUMAN.H11MO.0.C
0.741 0.971
TCF7L2
M09394_2.00
Homo sapiens
VVASWTCAAAGVV

BBCTTTGAWSTBB
Misc
Kulakovskiy et al.(2013)
TF7L2_HUMAN.H11MO.0.A
0.741 0.971
Tcf7l2
M09401_2.00
Mus musculus
VVASWTCAAAGVV

BBCTTTGAWSTBB
Misc
Kulakovskiy et al.(2013)
TF7L2_MOUSE.H11MO.0.A
0.741 0.971
TCF7L2
M09638_2.00
Homo sapiens
CCTTTGAWST

ASWTCAAAGG
Misc
Heinz et al.(2010)
K562-TCF7L2_GSE29196
0.741 0.971
TCF7L2
M11316_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF4_Q5_01
0.741 0.971
TCF7L2
M11317_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF4_Q5_02
0.741 0.971
TCF7L2
M11318_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF4_Q5
0.741 0.971
TCF7L2
M11319_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF7L2_06
0.741 0.971
Lef1
M00200_2.00
Mus musculus
NSWTCAAAVN

NBTTTGAWSN
PBM
Badis et al.(2009)
Lef1_3504
0.741 0.957
LEF1
M03511_2.00
Homo sapiens
NRAGATCAAAGRVWW

WWBYCTTTGATCTYN
SELEX
Jolma et al.(2013)
LEF1_1
0.741 0.957
LEF1
M05771_2.00
Homo sapiens
NSATCAAAS

STTTGATSN
SELEX
Yin et al.(2017)
LEF1_eDBD_HT-SELEX_1
0.741 0.957
LEF1
M05772_2.00
Homo sapiens
WCATCGRGRCGCTGW

WCAGCGYCYCGATGW
SELEX
Yin et al.(2017)
LEF1_eDBD_HT-SELEX_2
0.741 0.957
LEF1
M05775_2.00
Homo sapiens
ASATCAAAG

CTTTGATST
SELEX
Yin et al.(2017)
LEF1_FL_HT-SELEX_1
0.741 0.957
LEF1
M05776_2.00
Homo sapiens
ACATCGRGRCGCTGW

WCAGCGYCYCGATGT
SELEX
Yin et al.(2017)
LEF1_FL_HT-SELEX_2
0.741 0.957
LEF1
M05895_2.00
Homo sapiens
WTCAAAGNNN

NNNCTTTGAW
SMiLE-seq
Isakova et al.(2017)
LEF1
0.741 0.957
LEF1
M09392_2.00
Homo sapiens
BSYTTTSWNNTBYH

DRVANNWSAAARSV
Misc
Kulakovskiy et al.(2013)
LEF1_HUMAN.H11MO.0.A
0.741 0.957
Lef1
M09402_2.00
Mus musculus
BSYTTTSWNNTBYH

DRVANNWSAAARSV
Misc
Kulakovskiy et al.(2013)
LEF1_MOUSE.H11MO.0.B
0.741 0.957
LEF1
M11311_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LEF1_Q2_01
0.741 0.957
LEF1
M11312_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LEF1_Q3
0.741 0.957
LEF1
M11313_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LEF1_Q4
0.741 0.957
LEF1
M11314_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LEF1_Q5_01
0.741 0.957
LEF1
M11315_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LEF1_Q5
0.741 0.957
LEF1
M05773_2.00
Homo sapiens
ASATCAAAG

CTTTGATST
SELEX
Yin et al.(2017)
LEF1_eDBD_Methyl-HT-SELEX_1
0.741 0.957
LEF1
M05774_2.00
Homo sapiens
WCATCGRGGCGCTGW

WCAGCGCCYCGATGW
SELEX
Yin et al.(2017)
LEF1_eDBD_Methyl-HT-SELEX_2
0.741 0.957
LEF1
M05777_2.00
Homo sapiens
ASATCAAAG

CTTTGATST
SELEX
Yin et al.(2017)
LEF1_FL_Methyl-HT-SELEX_1
0.741 0.957
LEF1
M05778_2.00
Homo sapiens
ACATCGRGRCGCTGW

WCAGCGYCYCGATGT
SELEX
Yin et al.(2017)
LEF1_FL_Methyl-HT-SELEX_2
0.741 0.957
TCF7L1
M03512_2.00
Homo sapiens
AAAGATCAAAGG

CCTTTGATCTTT
SELEX
Jolma et al.(2013)
TCF7L1_1
0.741 0.942
TCF7L1
M05779_2.00
Homo sapiens
RSATCAAAG

CTTTGATSY
SELEX
Yin et al.(2017)
TCF7L1_eDBD_HT-SELEX_1
0.741 0.942
TCF7L1
M05780_2.00
Homo sapiens
ACATCGRGRCGCTGW

WCAGCGYCYCGATGT
SELEX
Yin et al.(2017)
TCF7L1_eDBD_HT-SELEX_2
0.741 0.942
TCF7L1
M09395_2.00
Homo sapiens
NBBCTTTGAWSTB

VASWTCAAAGVVN
Misc
Kulakovskiy et al.(2013)
TF7L1_HUMAN.H11MO.0.B
0.741 0.942
TCF7L1
M11320_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF3_01
0.741 0.942
TCF7L1
M11321_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF3_Q6_01
0.741 0.942
TCF7L1
M11322_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF3_Q6
0.741 0.942
TCF7L1
M05781_2.00
Homo sapiens
CTTTGATSY

RSATCAAAG
SELEX
Yin et al.(2017)
TCF7L1_eDBD_Methyl-HT-SELEX_1
0.741 0.942
TCF7L1
M05782_2.00
Homo sapiens
ACATCGRGRCGCTGW

WCAGCGYCYCGATGT
SELEX
Yin et al.(2017)
TCF7L1_eDBD_Methyl-HT-SELEX_2
0.741 0.942
Tcf7l1
M00207_2.00
Mus musculus
NNNNWWDN

NHWWNNNN
PBM
Badis et al.(2009)
Tcf3_3787
0.741 0.928
Tcf7l1
M09406_2.00
Mus musculus
BBCTTTGAWST

ASWTCAAAGVV
Misc
Kulakovskiy et al.(2013)
TF7L1_MOUSE.H11MO.0.A
0.741 0.928
Tcf7l1
M09407_2.00
Mus musculus
NDGCAGSTGBB

VVCASCTGCHN
Misc
Kulakovskiy et al.(2013)
TFE2_MOUSE.H11MO.0.A
0.741 0.928
pan
M06451_2.00
Drosophila melanogaster
DWYCAAAD

HTTTGRWH
B1H
Zhu et al.(2011)
pan_FlyReg_FBgn0085432
0.720 0.913
pan
M08428_2.00
Drosophila melanogaster
WHNAAAVRNRSCGM

KCGSYNYBTTTNDW
ChIP-chip
Mathelier et al.(2014)
MA0237.2
0.720 0.913
pan
M11337_2.00
Drosophila melanogaster
AAGATCAAAGG

CCTTTGATCTT
Transfac
Matys et al.(2006)
I$TCF_1
0.720 0.913
pan
M11338_2.00
Drosophila melanogaster Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$TCF_Q6
0.720 0.913
Tcf7
M00193_2.00
Mus musculus
HNHNNNNNN

NNNNNNDND
PBM
Badis et al.(2009)
Tcf7_0950
0.716 0.957
Tcf7
M03532_2.00
Mus musculus
AAASATCAAAGV

BCTTTGATSTTT
SELEX
Jolma et al.(2013)
Tcf7_1
0.716 0.957
TCF7
M05755_2.00
Homo sapiens
DSATCAAWS

SWTTGATSH
SELEX
Yin et al.(2017)
TCF7_eDBD_HT-SELEX_1
0.716 0.957
TCF7
M05756_2.00
Homo sapiens
WCWKCGYCYCGWTGW

WCAWCGRGRCGMWGW
SELEX
Yin et al.(2017)
TCF7_eDBD_HT-SELEX_2
0.716 0.957
TCF7
M05890_2.00
Homo sapiens
NNASATCAAASNN

NNSTTTGATSTNN
SMiLE-seq
Isakova et al.(2017)
TCF7
0.716 0.957
TCF7
M09386_2.00
Homo sapiens
NBBCTTTSAWSTBNBN

NVNVASWTSAAAGVVN
Misc
Kulakovskiy et al.(2013)
TCF7_HUMAN.H11MO.0.A
0.716 0.957
Tcf7
M09400_2.00
Mus musculus
VVRVADSAAARVVVNV

BNBBBYTTTSHTBYBB
Misc
Kulakovskiy et al.(2013)
TCF7_MOUSE.H11MO.0.A
0.716 0.957
TCF7
M11294_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF1_Q5_01
0.716 0.957
TCF7
M11295_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF1_Q5
0.716 0.957
TCF7
M05757_2.00
Homo sapiens
RSATCAAAS

STTTGATSY
SELEX
Yin et al.(2017)
TCF7_eDBD_Methyl-HT-SELEX_1
0.716 0.957
TCF7
M05758_2.00
Homo sapiens
WCAWCGRGRCGMWGW

WCWKCGYCYCGWTGW
SELEX
Yin et al.(2017)
TCF7_eDBD_Methyl-HT-SELEX_2
0.716 0.957
pop-1
M00712_2.00
Caenorhabditis elegans
NNHDWVNNNN

NNNNBWHDNN
PBM
Narasimhan et al.(2015)
pTH9135
0.515 0.551
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000002633 Sox 346 414
ENSTRUP00000002634 Sox 328 396
ENSTRUP00000002635 Sox 346 414
ENSTRUP00000002636 Sox 326 394
ENSTRUP00000002637 Sox 327 395
ENSTRUP00000002638 Sox 275 343
ENSTRUP00000002639 Sox 297 365
ENSTRUP00000002640 Sox 261 329
ENSTRUP00000002641 Sox 351 419
ENSTRUP00000002642 Sox 347 415

Links

Other Sox family TFs
Other Takifugu rubripes TFs

513 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL008660 Aedes aegypti AAEL008660 I 0.000
AALB002674 Anopheles albimanus AALB002674 I 0.000
AARA001906 Anopheles arabiensis AARA001906 I 0.000
AATE014019 Anopheles atroparvus AATE014019 I 0.000
ACEP14483 Atta cephalotes ACEP14483 I 0.000
ACHR004799 Anopheles christyi ACHR004799 I 0.000
ACOM034154 Anopheles coluzzii ACOM034154 I 0.000
ACUA004590 Anopheles culicifacies ACUA004590 I 0.000
ACYPI37626 Acyrthosiphon pisum ACYPI37626 I 0.000
ADAC008497 Anopheles darlingi ADAC008497 I 0.000
ADIR010545 Anopheles dirus ADIR010545 I 0.000
AEPI006242 Anopheles epiroticus AEPI006242 I 0.000
AFAF002909 Anopheles farauti AFAF002909 I 0.000
AFUN008310 Anopheles funestus AFUN008310 I 0.000
AGAP001448 Anopheles gambiae AGAP001448 I 0.000
AMAM018725 Anopheles maculatus AMAM018725 I 0.000
AMEC009154 Anopheles melas AMEC009154 I 0.000
AMEM011331 Anopheles merus AMEM011331 I 0.000
AMIN003266 Anopheles minimus AMIN003266 I 0.000
AQUA006634 Anopheles quadriannulatus AQUA006634 I 0.000
ASIS019386 Anopheles sinensis ASIS019386 I 0.000
BGLB003958 Biomphalaria glabrata BGLB003958 I 0.000
CapteG59283 Capitella teleta CapteG59283 I 0.000
Cflo_06174--XP_001120620.1_APIME Camponotus floridanus Cflo_06174--XP_001120620.1_APIME I 0.000
CGI_10017809 Crassostrea gigas CGI_10017809 I 0.000
CLEC012470 Cimex lectularius CLEC012470 I 0.000
CPIJ006258 Culex quinquefasciatus CPIJ006258 I 0.000
CpipJ_CPIJ006258 Culex pipiens CpipJ_CPIJ006258 I 0.000
csin111295 Clonorchis sinensis csin111295 I 0.000
D915_00775 Fasciola hepatica D915_00775 I 0.000
D917_00545 Trichinella nativa D917_00545 I 0.000
D918_01499 Trichuris suis D918_01499 I 0.000
DILT_0001058801 Diphyllobothrium latum DILT_0001058801 I 0.000
ECANG7_07852 Echinococcus canadensis ECANG7_07852 I 0.000
ECPE_0000418201 Echinostoma caproni ECPE_0000418201 I 0.000
EFV58245 Trichinella spiralis EFV58245 I 0.000
EmuJ_000998300 Echinococcus multilocularis EmuJ_000998300 I 0.000
ENSAMEG00000006374 Ailuropoda melanoleuca ENSAMEG00000006374 I 0.000
ENSAMXG00000008222 Astyanax mexicanus ENSAMXG00000008222 I 0.000
ENSCSAG00000012422 Chlorocebus sabaeus ENSCSAG00000012422 I 0.000
ENSFALG00000007280 Ficedula albicollis ENSFALG00000007280 I 0.000
ENSGMOG00000016849 Gadus morhua ENSGMOG00000016849 I 0.000
ENSLACG00000013727 Latimeria chalumnae ENSLACG00000013727 I 0.000
ENSLOCG00000003186 Lepisosteus oculatus ENSLOCG00000003186 I 0.000
ENSMEUG00000004292 Macropus eugenii ENSMEUG00000004292 I 0.000
ENSNLEG00000012897 Nomascus leucogenys ENSNLEG00000012897 I 0.000
ENSONIG00000016978 Oreochromis niloticus ENSONIG00000016978 I 0.000
ENSPANG00000023093 Papio anubis ENSPANG00000023093 I 0.000
ENSPFOG00000002486 Poecilia formosa ENSPFOG00000002486 I 0.000
ENSPMAG00000003727 Petromyzon marinus ENSPMAG00000003727 I 0.000
ENSPPYG00000002150 Pongo abelii ENSPPYG00000002150 I 0.000
ENSPSIG00000007810 Pelodiscus sinensis ENSPSIG00000007810 I 0.000
ENSPVAG00000013738 Pteropus vampyrus ENSPVAG00000013738 I 0.000
ENSSTOG00000022679 Ictidomys tridecemlineatus ENSSTOG00000022679 I 0.000
ENSTGUG00000001180 Taeniopygia guttata ENSTGUG00000001180 I 0.000
ENSXMAG00000015151 Xiphophorus maculatus ENSXMAG00000015151 I 0.000
estExt_fgenesh2_pg.C_640081 Branchiostoma floridae estExt_fgenesh2_pg.C_640081 I 0.000
estExt_GenewiseH_1.C_3210010 Branchiostoma floridae estExt_GenewiseH_1.C_3210010 I 0.000
estExt_GenewiseH_1.C_3210011 Branchiostoma floridae estExt_GenewiseH_1.C_3210011 I 0.000
Fer1 Drosophila melanogaster FBgn0037475 D 0.000
GA27498 Drosophila pseudoobscura FBgn0248864 I 0.000
GB41913 Apis mellifera GB41913 I 0.000
GD19915 Drosophila simulans FBgn0191398 I 0.000
GE24907 Drosophila yakuba FBgn0242002 I 0.000
GF17655 Drosophila ananassae FBgn0094673 I 0.000
GG13863 Drosophila erecta FBgn0106126 I 0.000
GH19006 Drosophila grimshawi FBgn0126473 I 0.000
GI23061 Drosophila mojavensis FBgn0145788 I 0.000
GJ24574 Drosophila virilis FBgn0211653 I 0.000
GK14521 Drosophila willistoni FBgn0216527 I 0.000
GL12422 Drosophila persimilis FBgn0150028 I 0.000
GM10936 Drosophila sechellia FBgn0165881 I 0.000
HelroG86431 Helobdella robusta HelroG86431 I 0.000
HmN_000218700 Hymenolepis microstoma HmN_000218700 I 0.000
Hsal_01096--XP_001120922.1_APIME Harpegnathos saltator Hsal_01096--XP_001120922.1_APIME I 0.000
ISCW003737 Ixodes scapularis ISCW003737 I 0.000
KGM_14030 Danaus plexippus KGM_14030 I 0.000
L798_11980 Zootermopsis nevadensis L798_11980 I 0.000
LCUP002382 Lucilia cuprina LCUP002382 I 0.000
LDEC016362 Leptinotarsa decemlineata LDEC016362 I 0.000
LLOJ003726 Lutzomyia longipalpis LLOJ003726 I 0.000
LLOJ004204 Lutzomyia longipalpis LLOJ004204 I 0.000
LLOJ005004 Lutzomyia longipalpis LLOJ005004 I 0.000
LotgiG66849 Lottia gigantea LotgiG66849 I 0.000
MCOS_0000879301 Mesocestoides corti MCOS_0000879301 I 0.000
MDOA013156 Musca domestica MDOA013156 I 0.000
MESCA008421 Megaselia scalaris MESCA008421 I 0.000
NEMVEDRAFT_v1g97005 Nematostella vectensis NEMVEDRAFT_v1g97005 I 0.000
Ocbimv22012139m.g Octopus bimaculoides Ocbimv22012139m.g I 0.000
PHUM498120 Pediculus humanus PHUM498120 I 0.000
PPAI005132 Phlebotomus papatasi PPAI005132 I 0.000
PTF1A Gorilla gorilla ENSGGOG00000015210 I 0.000
PTF1A Loxodonta africana ENSLAFG00000012682 I 0.000
PTF1A Myotis lucifugus ENSMLUG00000010122 I 0.000
PTF1A Monodelphis domestica ENSMODG00000008946 I 0.000
Ptf1a Mus musculus ENSMUSG00000026735 D 0.000
PTF1A Anolis carolinensis ENSACAG00000008717 I 0.000
PTF1A Callithrix jacchus ENSCJAG00000007862 I 0.000
PTF1A Cavia porcellus ENSCPOG00000022828 I 0.000
ptf1a Danio rerio ENSDARG00000014479 I 0.000
PTF1A Dasypus novemcinctus ENSDNOG00000035978 I 0.000
PTF1A Equus caballus ENSECAG00000012711 I 0.000
PTF1A Homo sapiens ENSG00000168267 D 0.000
ptf1a Gasterosteus aculeatus ENSGACG00000014760 I 0.000
PTF1A Otolemur garnettii ENSOGAG00000024685 I 0.000
ptf1a Oryzias latipes ENSORLG00000008277 I 0.000
PTF1A Tursiops truncatus ENSTTRG00000016843 I 0.000
PTF1A Bos taurus ENSBTAG00000047315 I 0.000
ptf1a Xenopus tropicalis XB-GENE-484425 I 0.000
ptf1a Takifugu rubripes ENSTRUG00000007713 I 0.000
PTF1A Tupaia belangeri ENSTBEG00000005210 I 0.000
PTF1A Sus scrofa ENSSSCG00000030662 I 0.000
PTF1A Procavia capensis ENSPCAG00000005440 I 0.000
Ptf1a Rattus norvegicus ENSRNOG00000016902 I 0.000
ptf1a.S Xenopus laevis XB-GENE-6466546 I 0.000
Pvit_04136 Pogona vitticeps Pvit_04136 I 0.000
RPRC001881 Rhodnius prolixus RPRC001881 I 0.000
Sakowv30041452m.g Saccoglossus kowalevskii Sakowv30041452m.g I 0.000
SBAD_0000858001 Soboliphyme baturini SBAD_0000858001 I 0.000
SMAR009985 Strigamia maritima SMAR009985 I 0.000
SMAR011911 Strigamia maritima SMAR011911 I 0.000
SMU15024587 Schmidtea mediterranea SMU15024587 I 0.000
SMU15028020 Schmidtea mediterranea SMU15028020 I 0.000
SMU15033768 Schmidtea mediterranea SMU15033768 I 0.000
SPU_002677 Strongylocentrotus purpuratus SPU_002677 I 0.000
SROB_0001629701 Schistosoma rodhaini SROB_0001629701 I 0.000
T265_12589 Opisthorchis viverrini T265_12589 I 0.000
TC014105 Tribolium castaneum TC014105 I 0.000
TMUE_s0036001100 Trichuris muris TMUE_s0036001100 I 0.000
TTRE_0000022101 Trichuris trichiura TTRE_0000022101 I 0.000
YQE_02105 Dendroctonus ponderosae YQE_02105 I 0.000