HmgZ (Drosophila melanogaster)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 FBgn0010228 T329505_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable DNA binding activity, bending. Predicted to be involved in regulation of transcription by RNA polymerase II. Is expressed in several structures, including embryonic brain; embryonic/larval midgut; extended germ band embryo; and larval ventral nerve cord. [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU02819
M02490_2.00 		Neurospora crassa
NNHNNNNNRN
NYNNNNNDNN		 PBM
Weirauch et al.(2014)
pTH9672 		0.435 0.433
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0071590 Sox 6 72
FBpp0071591 Sox 6 72
FBpp0309731 Sox 6 72
FBpp0311599 Sox 6 72

Links

Other Sox family TFs
Other Drosophila melanogaster TFs

Invalid Input OrderBy

238 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action