fgenesh_masked-pag1_scaffold_35-abinit-gene-0.129 (Pythium aphanidermatum)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 fgenesh_masked-pag1_scaffold_35-abinit-gene-0.129 T329864_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EPrPA00000014672 Sox 36 105
EPrPA00000014672 Sox 122 190

Links

Other Sox family TFs
Other Pythium aphanidermatum TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
maker-par_contig_1203-snap-gene-0.8 Pythium arrhenomanes maker-par_contig_1203-snap-gene-0.8 N 0.719
ALNC14_018350 Albugo laibachii ALNC14_018350 N 0.703
PYU1_G009116 Pythium ultimum PYU1_G009116 N 0.675
maker-piw_contig_2474-fgenesh-gene-0.2 Pythium iwayamai maker-piw_contig_2474-fgenesh-gene-0.2 N 0.672
maker-pir_contig_878-fgenesh-gene-0.5 Pythium irregulare maker-pir_contig_878-fgenesh-gene-0.5 N 0.671
SPRG_08822 Saprolegnia parasitica SPRG_08822 N 0.669
maker-pve_contig_787-fgenesh-gene-0.0 Pythium vexans maker-pve_contig_787-fgenesh-gene-0.0 N 0.666
fgenesh_scip_prom.46568.3800 Phytophthora kernoviae fgenesh_scip_prom.46568.3800 N 0.660
F443_13786 Phytophthora parasitica F443_13786 N 0.660
estExt_fgenesh1_kg.C_50989 Phytophthora capsici estExt_fgenesh1_kg.C_50989 N 0.659
Physo142322 Phytophthora sojae Physo142322 N 0.657
Phyra84677 Phytophthora ramorum Phyra84677 N 0.656
HpaG804287 Hyaloperonospora arabidopsidis HpaG804287 N 0.656
estExt_Genewise1Plus.C_21097 Fragilariopsis cylindrus estExt_Genewise1Plus.C_21097 N 0.451