fgenesh_scip_prom.46568.1753 (Phytophthora kernoviae)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 fgenesh_scip_prom.46568.1753 T329872_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh_scip_prom.46568.1753 Sox 29 97
fgenesh_scip_prom.46568.1753 Sox 117 185

Links

Other Sox family TFs
Other Phytophthora kernoviae TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PITG_16117 Phytophthora infestans PITG_16117 N 0.732
F443_05401 Phytophthora parasitica F443_05401 N 0.728
Phyra73033 Phytophthora ramorum Phyra73033 N 0.721
fgenesh_scip_prom.28083.225 Phytophthora lateralis fgenesh_scip_prom.28083.225 N 0.721
estExt_fgenesh1_kg.C_12090001 Phytophthora capsici estExt_fgenesh1_kg.C_12090001 N 0.706
maker-pir_contig_78-fgenesh-gene-0.0 Pythium irregulare maker-pir_contig_78-fgenesh-gene-0.0 N 0.695
PYU1_G009481 Pythium ultimum PYU1_G009481 N 0.690
ALNC14_025770 Albugo laibachii ALNC14_025770 N 0.684
maker-pag1_scaffold_208-fgenesh-gene-0.7 Pythium aphanidermatum maker-pag1_scaffold_208-fgenesh-gene-0.7 N 0.658
maker-pve_contig_1-fgenesh-gene-1.10 Pythium vexans maker-pve_contig_1-fgenesh-gene-1.10 N 0.656
maker-par_contig_8731-fgenesh-gene-0.0 Pythium arrhenomanes maker-par_contig_8731-fgenesh-gene-0.0 N 0.634
estExt_fgenesh1_kg.C_40116 Phytophthora capsici estExt_fgenesh1_kg.C_40116 N 0.554
SPRG_05304 Saprolegnia parasitica SPRG_05304 N 0.528
HpaG806488 Hyaloperonospora arabidopsidis HpaG806488 N 0.503
maker-pve_contig_1-fgenesh-gene-1.21 Pythium vexans maker-pve_contig_1-fgenesh-gene-1.21 N 0.450