fgenesh_scip_prom.46568.2049 (Phytophthora kernoviae)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 fgenesh_scip_prom.46568.2049 T329873_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh_scip_prom.46568.2049 Sox 204 249

Links

Other Sox family TFs
Other Phytophthora kernoviae TFs

113 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
fgenesh1_pg.C_scaffold_73784000001 Phytophthora capsici fgenesh1_pg.C_scaffold_73784000001 N 0.712
estExt_fgenesh1_kg.C_80399 Phytophthora capsici estExt_fgenesh1_kg.C_80399 N 0.712
maker-piw_contig_1911-snap-gene-0.6 Pythium iwayamai maker-piw_contig_1911-snap-gene-0.6 N 0.702
maker-pir_contig_430-fgenesh-gene-0.3 Pythium irregulare maker-pir_contig_430-fgenesh-gene-0.3 N 0.702
Physo132366 Phytophthora sojae Physo132366 N 0.680
F443_19335 Phytophthora parasitica F443_19335 N 0.680
SPRG_06372 Saprolegnia parasitica SPRG_06372 N 0.669
PYU1_G003004 Pythium ultimum PYU1_G003004 N 0.669
RPRC009760 Rhodnius prolixus RPRC009760 N 0.656
fgenesh_scip_prom.28083.7036 Phytophthora lateralis fgenesh_scip_prom.28083.7036 N 0.655
Phyra74523 Phytophthora ramorum Phyra74523 N 0.655
ALNC14_126360 Albugo laibachii ALNC14_126360 N 0.645
CPIJ005084 Culex quinquefasciatus CPIJ005084 N 0.625
maker-pve_contig_105-snap-gene-0.29 Pythium vexans maker-pve_contig_105-snap-gene-0.29 N 0.625
CpipJ_CPIJ005084 Culex pipiens CpipJ_CPIJ005084 N 0.625
OESDEN_05486 Oesophagostomum dentatum OESDEN_05486 N 0.607
CapteG224864 Capitella teleta CapteG224864 I 0.603
TCLT_0001081001 Thelazia callipaeda TCLT_0001081001 N 0.599
HCOI00594600 Haemonchus contortus HCOI00594600 N 0.597
HPBE_0001252601 Heligmosomoides bakeri HPBE_0001252601 N 0.597
MCINX012524 Melitaea cinxia MCINX012524 I 0.597
MDOA001488 Musca domestica MDOA001488 I 0.597
ACAC_0000409101 Angiostrongylus cantonensis ACAC_0000409101 N 0.597
DICVIV_03175 Dictyocaulus viviparus DICVIV_03175 N 0.597
ANCCEY_08672 Ancylostoma ceylanicum ANCCEY_08672 N 0.597
ACOC_0001323101 Angiostrongylus costaricensis ACOC_0001323101 N 0.597
ALUE_0001851001 Ascaris lumbricoides ALUE_0001851001 N 0.597
TELCIR_11967 Teladorsagia circumcincta TELCIR_11967 N 0.597
ANCCAN_29654 Ancylostoma caninum ANCCAN_29654 N 0.597
Y73E7A.1 Caenorhabditis elegans WBGene00022268 N 0.597
ASU_10445 Ascaris suum ASU_10445 N 0.597
NV13812 Nasonia vitripennis NV13812 I 0.597
PEQ_0000413701 Parascaris equorum PEQ_0000413701 N 0.597
NBR_0000605501 Nippostrongylus brasiliensis NBR_0000605501 N 0.597
HPLM_0000348901 Haemonchus placei HPLM_0000348901 N 0.597
NECAME_12352 Necator americanus NECAME_12352 N 0.597
KGM_20190 Danaus plexippus KGM_20190 I 0.597
tetur18g00680 Tetranychus urticae tetur18g00680 I 0.596
HHAL005242-PA Halyomorpha halys HHAL005242-PA I 0.596
CBN09380 Caenorhabditis brenneri CBN09380 N 0.591
CRE03905 Caenorhabditis remanei CRE03905 N 0.591
CJA05209 Caenorhabditis japonica CJA05209 N 0.591
HelroG66455 Helobdella robusta HelroG66455 N 0.590
ASIS023527 Anopheles sinensis ASIS023527 N 0.579
AQUA009805 Anopheles quadriannulatus AQUA009805 N 0.579
ASTEI04275 Anopheles stephensi ASTEI04275 N 0.579
AMEC005071 Anopheles melas AMEC005071 N 0.579
AFUN011346 Anopheles funestus AFUN011346 N 0.579
AARA009694 Anopheles arabiensis AARA009694 N 0.579
AALB007196 Anopheles albimanus AALB007196 N 0.579
AEPI008570 Anopheles epiroticus AEPI008570 N 0.579
ACHR002403 Anopheles christyi ACHR002403 N 0.579
AMEM002948 Anopheles merus AMEM002948 N 0.579
AMIN003838 Anopheles minimus AMIN003838 N 0.579
ACUA003510 Anopheles culicifacies ACUA003510 N 0.579
ACOM033320 Anopheles coluzzii ACOM033320 N 0.579
AFAF018499 Anopheles farauti AFAF018499 N 0.579
AGAP004110 Anopheles gambiae AGAP004110 N 0.579
ADIR002941 Anopheles dirus ADIR002941 N 0.579
AATE006267 Anopheles atroparvus AATE006267 N 0.579
ADAC009894 Anopheles darlingi ADAC009894 N 0.579
GB50764 Apis mellifera GB50764 I 0.567
GPUH_0000676401 Gongylonema pulchrum GPUH_0000676401 N 0.567
Cflo_06133--XP_394373.1_APIME Camponotus floridanus Cflo_06133--XP_394373.1_APIME I 0.567
NEMVEDRAFT_v1g201358 Nematostella vectensis NEMVEDRAFT_v1g201358 I 0.567
Minc12734 Meloidogyne incognita Minc12734 N 0.560
SINV12391 Solenopsis invicta SINV12391 I 0.560
MhA1_Contig1250.frz3.gene10 Meloidogyne hapla MhA1_Contig1250.frz3.gene10 N 0.560
Hsal_04778--XP_394373.1_APIME Harpegnathos saltator Hsal_04778--XP_394373.1_APIME I 0.560
Ocbimv22013575m.g Octopus bimaculoides Ocbimv22013575m.g I 0.560
ACEP12759 Atta cephalotes ACEP12759 I 0.560
maker-nMf.1.1.scaf18285-snap-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf18285-snap-gene-0.4 N 0.560
ISCW011313 Ixodes scapularis ISCW011313 N 0.557
CGI_10019404 Crassostrea gigas CGI_10019404 N 0.555
BGIBMGA013514 Bombyx mori BGIBMGA013514 N 0.552
HMEL009197 Heliconius melpomene HMEL009197 N 0.552
PHUM036320 Pediculus humanus PHUM036320 N 0.551
AAEL008417 Aedes aegypti AAEL008417 N 0.540
DAPPUDRAFT_303074 Daphnia pulex DAPPUDRAFT_303074 N 0.535
AMAM021723 Anopheles maculatus AMAM021723 N 0.534
ACYPI003297 Acyrthosiphon pisum ACYPI003297 I 0.527
estExt_fgenesh2_pg.C_1070085 Branchiostoma floridae estExt_fgenesh2_pg.C_1070085 N 0.521
estExt_fgenesh2_pm.C_3240002 Branchiostoma floridae estExt_fgenesh2_pm.C_3240002 N 0.521
GE25578 Drosophila yakuba FBgn0242642 I 0.516
GK13574 Drosophila willistoni FBgn0215582 I 0.516
GH18160 Drosophila grimshawi FBgn0125628 I 0.516
GUITHDRAFT_162866 Guillardia theta GUITHDRAFT_162866 N 0.515
LotgiG126557 Lottia gigantea LotgiG126557 N 0.512
CLEC002888 Cimex lectularius CLEC002888 N 0.510
fgeneshCV_pg.C_scaffold_2000022 Chlorella vulgaris fgeneshCV_pg.C_scaffold_2000022 N 0.508
fgenesh1_pm.2_#_13 Coccomyxa subellipsoidea C169 fgenesh1_pm.2_#_13 N 0.508
SBAD_0000307901 Soboliphyme baturini SBAD_0000307901 N 0.505
LCUP006380 Lucilia cuprina LCUP006380 N 0.501
SPU_001776 Strongylocentrotus purpuratus SPU_001776 N 0.487
TGME49_037260 Toxoplasma gondii TGME49_037260 N 0.467
ccdc124 Oryzias latipes ENSORLG00000015728 N 0.466
ETH_00032160 Eimeria tenella ETH_00032160 N 0.465
CMU_009510 Cryptosporidium muris CMU_009510 N 0.462
TC004658 Tribolium castaneum TC004658 N 0.460
TRE_0001918901 Trichobilharzia regenti TRE_0001918901 N 0.455
ML11467a Mnemiopsis leidyi ML11467a N 0.445
Sjc_0011880 Schistosoma japonicum Sjc_0011880 N 0.443
D918_07944 Trichuris suis D918_07944 N 0.442
SMRZ_0002114501 Schistosoma margrebowiei SMRZ_0002114501 N 0.436
ENSCING00000023833 Ciona intestinalis ENSCING00000023833 N 0.436
Smp_004360 Schistosoma mansoni Smp_004360 N 0.436
A_06553 Schistosoma haematobium A_06553 N 0.436
BATDEDRAFT_7789 Batrachochytrium dendrobatidis BATDEDRAFT_7789 I 0.430
DILT_0001250601 Diphyllobothrium latum DILT_0001250601 N 0.429
NCLIV_051130 Neospora caninum NCLIV_051130 N 0.429
PLICRDRAFT_179042 Plicaturopsis crispa PLICRDRAFT_179042 I 0.419
EFV51436 Trichinella spiralis EFV51436 N 0.418
D917_07703 Trichinella nativa D917_07703 N 0.418