fgenesh_scip_prom.46568.3800 (Phytophthora kernoviae)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 fgenesh_scip_prom.46568.3800 T329874_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh_scip_prom.46568.3800 Sox 37 106
fgenesh_scip_prom.46568.3800 Sox 123 191

Links

Other Sox family TFs
Other Phytophthora kernoviae TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F443_13786 Phytophthora parasitica F443_13786 N 0.741
estExt_fgenesh1_kg.C_50989 Phytophthora capsici estExt_fgenesh1_kg.C_50989 N 0.740
Physo142322 Phytophthora sojae Physo142322 N 0.738
HpaG804287 Hyaloperonospora arabidopsidis HpaG804287 N 0.737
Phyra84677 Phytophthora ramorum Phyra84677 N 0.737
maker-pir_contig_878-fgenesh-gene-0.5 Pythium irregulare maker-pir_contig_878-fgenesh-gene-0.5 N 0.721
SPRG_08822 Saprolegnia parasitica SPRG_08822 N 0.719
maker-piw_contig_2474-fgenesh-gene-0.2 Pythium iwayamai maker-piw_contig_2474-fgenesh-gene-0.2 N 0.714
PYU1_G009116 Pythium ultimum PYU1_G009116 N 0.707
maker-pve_contig_787-fgenesh-gene-0.0 Pythium vexans maker-pve_contig_787-fgenesh-gene-0.0 N 0.695
ALNC14_018350 Albugo laibachii ALNC14_018350 N 0.680
maker-par_contig_1203-snap-gene-0.8 Pythium arrhenomanes maker-par_contig_1203-snap-gene-0.8 N 0.667
fgenesh_masked-pag1_scaffold_35-abinit-gene-0.129 Pythium aphanidermatum fgenesh_masked-pag1_scaffold_35-abinit-gene-0.129 N 0.660
estExt_Genewise1Plus.C_21097 Fragilariopsis cylindrus estExt_Genewise1Plus.C_21097 N 0.425