GB41600 (Apis mellifera)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 GB41600 T329987_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Hmg20b
M02487_2.00
Mus musculus
NNATTATWHWN

NWDWATAATNN
PBM
Weirauch et al.(2014)
pTH8555
0.421 0.536
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GB41600-PA Sox 83 151

Links

Other Sox family TFs
Other Apis mellifera TFs

183 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACYPI34316 Acyrthosiphon pisum ACYPI34316 N 0.467
ACYPI001201 Acyrthosiphon pisum ACYPI001201 N 0.476
ACYPI002322 Acyrthosiphon pisum ACYPI002322 I 0.506
AAEL005309 Aedes aegypti AAEL005309 N 0.438
AAEL013914 Aedes aegypti AAEL013914 N 0.438
ENSAMEG00000005678 Ailuropoda melanoleuca ENSAMEG00000005678 I 0.421
ENSAMEG00000008348 Ailuropoda melanoleuca ENSAMEG00000008348 I 0.448
ENSAMEG00000010946 Ailuropoda melanoleuca ENSAMEG00000010946 I 0.418
Alligator_sinensis_CCG000441.1 Alligator sinensis Alligator_sinensis_CCG000441.1 I 0.421
Alligator_sinensis_CCG010545.1 Alligator sinensis Alligator_sinensis_CCG010545.1 I 0.456
ENSAPLG00000005528 Anas platyrhynchos ENSAPLG00000005528 I 0.421
ENSAPLG00000015603 Anas platyrhynchos ENSAPLG00000015603 I 0.456
HMG20A Anolis carolinensis ENSACAG00000011520 I 0.456
AALB007513 Anopheles albimanus AALB007513 N 0.431
AARA006038 Anopheles arabiensis AARA006038 N 0.423
AATE005479 Anopheles atroparvus AATE005479 N 0.430
ACHR006951 Anopheles christyi ACHR006951 N 0.430
ACOM038391 Anopheles coluzzii ACOM038391 N 0.423
ACUA004787 Anopheles culicifacies ACUA004787 N 0.448
ADAC004351 Anopheles darlingi ADAC004351 N 0.431
ADIR009189 Anopheles dirus ADIR009189 N 0.462
AEPI008671 Anopheles epiroticus AEPI008671 N 0.430
AFAF015452 Anopheles farauti AFAF015452 N 0.481
AFUN010952 Anopheles funestus AFUN010952 N 0.478
AGAP004791 Anopheles gambiae AGAP004791 N 0.423
AGAP004789 Anopheles gambiae AGAP004789 N 0.423
AMIN008132 Anopheles minimus AMIN008132 N 0.448
AQUA002593 Anopheles quadriannulatus AQUA002593 N 0.423
ASTEI08088 Anopheles stephensi ASTEI08088 N 0.448
Afo_R007008 Aptenodytes forsteri Afo_R007008 I 0.456
Afo_R007636 Aptenodytes forsteri Afo_R007636 I 0.421
ENSAMXG00000013048 Astyanax mexicanus ENSAMXG00000013048 I 0.496
ENSAMXG00000017986 Astyanax mexicanus ENSAMXG00000017986 I 0.429
ACEP22292 Atta cephalotes ACEP22292 N 0.616
BGLB005856 Biomphalaria glabrata BGLB005856 N 0.428
BGLB012439 Biomphalaria glabrata BGLB012439 N 0.428
BGIBMGA005325 Bombyx mori BGIBMGA005325 I 0.554
ENSP00000336856-D1 Bos grunniens ENSP00000336856-D1 I 0.448
HMG20A Bos taurus ENSBTAG00000020441 I 0.448
ENSBTAG00000047668 Bos taurus ENSBTAG00000047668 I 0.421
estExt_fgenesh2_pg.C_2300014 Branchiostoma floridae estExt_fgenesh2_pg.C_2300014 I 0.487
estExt_fgenesh2_pg.C_2300011 Branchiostoma floridae estExt_fgenesh2_pg.C_2300011 I 0.487
Brh_R011859 Buceros rhinoceros Brh_R011859 I 0.456
HMG20B Callithrix jacchus ENSCJAG00000003488 I 0.429
HMG20A Callithrix jacchus ENSCJAG00000011131 I 0.448
Aan_R011791 Calypte anna Aan_R011791 I 0.456
Aan_R011684 Calypte anna Aan_R011684 I 0.421
Cflo_07151--XP_625193.1_APIME Camponotus floridanus Cflo_07151--XP_625193.1_APIME N 0.627
HMG20B Canis familiaris ENSCAFG00000019215 I 0.421
HMG20A Canis familiaris ENSCAFG00000018061 I 0.448
CapteG155070 Capitella teleta CapteG155070 I 0.582
CapteG191691 Capitella teleta CapteG191691 I 0.420
HMG20B Cavia porcellus ENSCPOG00000010777 I 0.421
HMG20A Cavia porcellus ENSCPOG00000011704 I 0.448
Cmyd_10002377 Chelonia mydas Cmyd_10002377 I 0.421
Cmyd_10010094 Chelonia mydas Cmyd_10010094 I 0.456
ENSCSAG00000014734 Chlorocebus sabaeus ENSCSAG00000014734 I 0.448
ENSCSAG00000011140 Chlorocebus sabaeus ENSCSAG00000011140 I 0.421
HMG20A Choloepus hoffmanni ENSCHOG00000012116 I 0.448
CLEC002862 Cimex lectularius CLEC002862 I 0.649
ENSCING00000018888 Ciona intestinalis ENSCING00000018888 N 0.438
CpipJ_CPIJ004396 Culex pipiens CpipJ_CPIJ004396 N 0.506
CPIJ004396 Culex quinquefasciatus CPIJ004396 N 0.506
KGM_20768 Danaus plexippus KGM_20768 N 0.506
hmg20b Danio rerio ENSDARG00000042045 I 0.429
hmg20a Danio rerio ENSDARG00000031198 I 0.461
DAPPUDRAFT_189566 Daphnia pulex DAPPUDRAFT_189566 N 0.470
HMG20A Dasypus novemcinctus ENSDNOG00000034143 I 0.448
YQE_04289 Dendroctonus ponderosae YQE_04289 N 0.633
Hmg20a Dipodomys ordii ENSDORG00000000623 I 0.448
HMG20A Echinops telfairi ENSETEG00000015812 I 0.448
HMG20A Erinaceus europaeus ENSEEUG00000004472 I 0.448
HMG20A Felis catus ENSFCAG00000022539 I 0.448
HMG20B Felis catus ENSFCAG00000026167 I 0.421
ENSFALG00000011609 Ficedula albicollis ENSFALG00000011609 I 0.421
ENSFALG00000010751 Ficedula albicollis ENSFALG00000010751 I 0.456
ENSGMOG00000011717 Gadus morhua ENSGMOG00000011717 I 0.427
ENSGMOG00000015452 Gadus morhua ENSGMOG00000015452 I 0.492
ENSGALG00000002746 Gallus gallus ENSGALG00000002746 I 0.456
HMG20B Gallus gallus ENSGALG00000027838 I 0.421
hmg20b Gasterosteus aculeatus ENSGACG00000012785 I 0.418
hmg20a Gasterosteus aculeatus ENSGACG00000003466 I 0.496
Gfo_R004366 Geospiza fortis Gfo_R004366 I 0.425
Gfo_R007604 Geospiza fortis Gfo_R007604 I 0.421
HMG20A Gorilla gorilla ENSGGOG00000008439 I 0.448
HMG20B Gorilla gorilla ENSGGOG00000014805 I 0.421
HHAL010521-PA Halyomorpha halys HHAL010521-PA I 0.651
Hsal_13222--XP_625193.1_APIME Harpegnathos saltator Hsal_13222--XP_625193.1_APIME I 0.689
HMEL017569 Heliconius melpomene HMEL017569 I 0.558
HMG20A Homo sapiens ENSG00000140382 I 0.448
HMG20B Homo sapiens ENSG00000064961 I 0.421
ENSSTOG00000013818 Ictidomys tridecemlineatus ENSSTOG00000013818 I 0.448
ENSSTOG00000022314 Ictidomys tridecemlineatus ENSSTOG00000022314 I 0.421
ENSLACG00000004599 Latimeria chalumnae ENSLACG00000004599 I 0.459
ENSLOCG00000014255 Lepisosteus oculatus ENSLOCG00000014255 I 0.468
LDEC005234 Leptinotarsa decemlineata LDEC005234 N 0.592
LotgiG196090 Lottia gigantea LotgiG196090 I 0.581
HMG20A Loxodonta africana ENSLAFG00000018273 I 0.448
HMG20B Loxodonta africana ENSLAFG00000007845 I 0.421
ENSP00000371133 Macaca fascicularis ENSP00000371133 I 0.448
HMG20A Macaca mulatta ENSMMUG00000007430 I 0.448
ENSMEUG00000001270 Macropus eugenii ENSMEUG00000001270 I 0.421
ENSMEUG00000016429 Macropus eugenii ENSMEUG00000016429 I 0.448
HMG20B Meleagris gallopavo ENSMGAG00000001362 I 0.421
HMG20A Meleagris gallopavo ENSMGAG00000003179 I 0.456
MCINX003064 Melitaea cinxia MCINX003064 I 0.566
HMG20A Microcebus murinus ENSMICG00000011025 I 0.448
HMG20B Monodelphis domestica ENSMODG00000006884 I 0.421
HMG20A Monodelphis domestica ENSMODG00000012113 I 0.448
ENSMPUG00000003925 Mustela putorius furo ENSMPUG00000003925 I 0.421
ENSMPUG00000017330 Mustela putorius furo ENSMPUG00000017330 I 0.448
Hmg20b Mus musculus ENSMUSG00000020232 D 0.421
Hmg20a Mus musculus ENSMUSG00000032329 I 0.448
Myotis_brandtii_HMG20B_10016321 Myotis brandtii Myotis_brandtii_HMG20B_10016321 I 0.421
Myotis_brandtii_HMG20A_10005450 Myotis brandtii Myotis_brandtii_HMG20A_10005450 I 0.448
HMG20A Myotis lucifugus ENSMLUG00000011648 I 0.448
HMG20B Myotis lucifugus ENSMLUG00000022392 I 0.421
NV11068 Nasonia vitripennis NV11068 I 0.667
NEMVEDRAFT_v1g87244 Nematostella vectensis NEMVEDRAFT_v1g87244 I 0.415
NEMVEDRAFT_v1g105457 Nematostella vectensis NEMVEDRAFT_v1g105457 I 0.484
ENSNLEG00000008357 Nomascus leucogenys ENSNLEG00000008357 I 0.448
Ocbimv22031259m.g Octopus bimaculoides Ocbimv22031259m.g I 0.587
ENSONIG00000004838 Oreochromis niloticus ENSONIG00000004838 I 0.418
ENSONIG00000012862 Oreochromis niloticus ENSONIG00000012862 I 0.496
HMG20A Ornithorhynchus anatinus ENSOANG00000009993 I 0.448
HMG20B Ornithorhynchus anatinus ENSOANG00000013515 I 0.421
HMG20A Oryctolagus cuniculus ENSOCUG00000005648 I 0.448
hmg20a Oryzias latipes ENSORLG00000001794 I 0.496
hmg20b Oryzias latipes ENSORLG00000004640 I 0.418
HMG20B Otolemur garnettii ENSOGAG00000014171 I 0.421
HMG20A Otolemur garnettii ENSOGAG00000006630 I 0.448
ENSOARG00000012318 Ovis aries ENSOARG00000012318 I 0.421
ENSOARG00000001765 Ovis aries ENSOARG00000001765 I 0.448
ENSOARG00000005838 Ovis aries ENSOARG00000005838 I 0.424
HMG20A Pan troglodytes ENSPTRG00000007326 I 0.448
ENSPANG00000015844 Papio anubis ENSPANG00000015844 I 0.448
ENSPANG00000010575 Papio anubis ENSPANG00000010575 I 0.421
PHUM514030 Pediculus humanus PHUM514030 N 0.448
ENSPSIG00000010923 Pelodiscus sinensis ENSPSIG00000010923 I 0.421
ENSPSIG00000013006 Pelodiscus sinensis ENSPSIG00000013006 I 0.456
ENSPFOG00000014087 Poecilia formosa ENSPFOG00000014087 I 0.496
ENSPFOG00000003017 Poecilia formosa ENSPFOG00000003017 I 0.418
Pvit_08123 Pogona vitticeps Pvit_08123 I 0.421
Pvit_01997 Pogona vitticeps Pvit_01997 I 0.456
ENSPPYG00000009378 Pongo abelii ENSPPYG00000009378 I 0.421
ENSPPYG00000006683 Pongo abelii ENSPPYG00000006683 I 0.448
HMG20A Procavia capensis ENSPCAG00000013879 I 0.448
HMG20B Procavia capensis ENSPCAG00000010772 I 0.421
Hmg20b Rattus norvegicus ENSRNOG00000020601 I 0.421
Hmg20a Rattus norvegicus ENSRNOG00000016905 I 0.448
RPRC008043 Rhodnius prolixus RPRC008043 I 0.604
Sakowv30033800m.g Saccoglossus kowalevskii Sakowv30033800m.g I 0.501
ENSSHAG00000007226 Sarcophilus harrisii ENSSHAG00000007226 I 0.421
ENSSHAG00000012311 Sarcophilus harrisii ENSSHAG00000012311 I 0.448
SINV20852 Solenopsis invicta SINV20852 N 0.616
SMAR000790 Strigamia maritima SMAR000790 I 0.415
SMAR002604 Strigamia maritima SMAR002604 I 0.446
SPU_018371 Strongylocentrotus purpuratus SPU_018371 I 0.535
SPU_004776 Strongylocentrotus purpuratus SPU_004776 I 0.535
ENSSSCG00000024002 Sus scrofa ENSSSCG00000024002 I 0.448
HMG20A Sus scrofa ENSSSCG00000001871 I 0.448
HMG20B Taeniopygia guttata ENSTGUG00000000169 I 0.421
HMG20A Taeniopygia guttata ENSTGUG00000003690 I 0.456
eef2l2 Takifugu rubripes ENSTRUG00000017921 I 0.418
hmg20a Takifugu rubripes ENSTRUG00000016127 I 0.496
ENSTSYG00000003485 Tarsius syrichta ENSTSYG00000003485 I 0.448
hmg20a Tetraodon nigroviridis ENSTNIG00000008460 I 0.496
hmg20b Tetraodon nigroviridis ENSTNIG00000010630 I 0.418
TC009230 Tribolium castaneum TC009230 N 0.589
TriadG23407 Trichoplax adhaerens TriadG23407 I 0.531
HMG20A Tupaia belangeri ENSTBEG00000015283 I 0.448
HMG20B Tursiops truncatus ENSTTRG00000008832 I 0.421
HMG20A Tursiops truncatus ENSTTRG00000006500 I 0.448
Tal_R006697 Tyto alba Tal_R006697 I 0.456
HMG20A Vicugna pacos ENSVPAG00000010013 I 0.448
hmg20b.L Xenopus laevis XB-GENE-5809135 I 0.428
hmg20a.L Xenopus laevis XB-GENE-955359 I 0.459
hmg20b.S Xenopus laevis XB-GENE-17338323 I 0.428
hmg20b Xenopus tropicalis XB-GENE-5809048 I 0.428
hmg20a Xenopus tropicalis XB-GENE-955353 I 0.459
ENSXMAG00000012647 Xiphophorus maculatus ENSXMAG00000012647 I 0.418
ENSXMAG00000000587 Xiphophorus maculatus ENSXMAG00000000587 I 0.496
L798_15457 Zootermopsis nevadensis L798_15457 I 0.654