CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLOINDRAFT_11295
(
Rhizophagus irregularis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
GLOINDRAFT_11295
T330027_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ERZ97721
Sox
65
127
LSRATNKFLIYRNEYAKELQNQGFRLSMREVSRMAAKSWKREPQHVKRKYEDIAREVERIHVQ
Links
Other
Sox
family TFs
Other
Rhizophagus irregularis
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLOINDRAFT_85283
Rhizophagus irregularis
GLOINDRAFT_85283
N
0.565
GLOINDRAFT_34686
Rhizophagus irregularis
GLOINDRAFT_34686
N
0.487
GLOINDRAFT_30433
Rhizophagus irregularis
GLOINDRAFT_30433
N
0.471
GLOINDRAFT_13874
Rhizophagus irregularis
GLOINDRAFT_13874
N
0.465
GLOINDRAFT_13510
Rhizophagus irregularis
GLOINDRAFT_13510
N
0.464
GLOINDRAFT_342407
Rhizophagus irregularis
GLOINDRAFT_342407
N
0.462
GLOINDRAFT_14813
Rhizophagus irregularis
GLOINDRAFT_14813
N
0.462
GLOINDRAFT_319204
Rhizophagus irregularis
GLOINDRAFT_319204
N
0.459
GLOINDRAFT_15291
Rhizophagus irregularis
GLOINDRAFT_15291
N
0.457
GLOINDRAFT_330944
Rhizophagus irregularis
GLOINDRAFT_330944
N
0.455
GLOINDRAFT_36235
Rhizophagus irregularis
GLOINDRAFT_36235
N
0.453
GLOINDRAFT_18435
Rhizophagus irregularis
GLOINDRAFT_18435
N
0.449
GLOINDRAFT_349586
Rhizophagus irregularis
GLOINDRAFT_349586
N
0.449
GLOINDRAFT_374
Rhizophagus irregularis
GLOINDRAFT_374
N
0.447
GLOINDRAFT_14857
Rhizophagus irregularis
GLOINDRAFT_14857
N
0.446
GLOINDRAFT_161021
Rhizophagus irregularis
GLOINDRAFT_161021
N
0.445
GLOINDRAFT_339213
Rhizophagus irregularis
GLOINDRAFT_339213
N
0.441
GLOINDRAFT_320919
Rhizophagus irregularis
GLOINDRAFT_320919
N
0.437
GLOINDRAFT_27042
Rhizophagus irregularis
GLOINDRAFT_27042
N
0.437
GLOINDRAFT_347004
Rhizophagus irregularis
GLOINDRAFT_347004
N
0.432
GLOINDRAFT_35702
Rhizophagus irregularis
GLOINDRAFT_35702
N
0.431
GLOINDRAFT_21291
Rhizophagus irregularis
GLOINDRAFT_21291
N
0.431
GLOINDRAFT_22824
Rhizophagus irregularis
GLOINDRAFT_22824
N
0.427
GLOINDRAFT_322903
Rhizophagus irregularis
GLOINDRAFT_322903
N
0.425
GLOINDRAFT_36163
Rhizophagus irregularis
GLOINDRAFT_36163
N
0.423
PHUM605170
Pediculus humanus
PHUM605170
I
0.420
GLOINDRAFT_9937
Rhizophagus irregularis
GLOINDRAFT_9937
N
0.420
GLOINDRAFT_31701
Rhizophagus irregularis
GLOINDRAFT_31701
N
0.418