CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLOINDRAFT_28614
(
Rhizophagus irregularis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
GLOINDRAFT_28614
T330077_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ESA11152
Sox
105
136
PPRPPNAFILYRRAKQPGIVASHQGITNNEVS
Links
Other
Sox
family TFs
Other
Rhizophagus irregularis
TFs
161 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L798_04020
Zootermopsis nevadensis
L798_04020
N
0.527
L798_09360
Zootermopsis nevadensis
L798_09360
N
0.527
SOX9
Dasypus novemcinctus
ENSDNOG00000033826
I
0.517
SOX6
Choloepus hoffmanni
ENSCHOG00000005751
I
0.505
ENSTSYG00000012536
Tarsius syrichta
ENSTSYG00000012536
I
0.505
ADIR005630
Anopheles dirus
ADIR005630
I
0.505
SOX6
Erinaceus europaeus
ENSEEUG00000006749
I
0.505
SOX6
Echinops telfairi
ENSETEG00000001898
I
0.505
SOX6
Procavia capensis
ENSPCAG00000001398
N
0.505
SOX5
Sorex araneus
ENSSARG00000007963
I
0.505
SOX13
Microcebus murinus
ENSMICG00000009236
I
0.505
ENSMEUG00000008151
Macropus eugenii
ENSMEUG00000008151
I
0.505
SOX6
Tupaia belangeri
ENSTBEG00000002476
I
0.505
MESCA000459
Megaselia scalaris
MESCA000459
I
0.505
ANCDUO_25812
Ancylostoma duodenale
ANCDUO_25812
N
0.505
TCLT_0000083701
Thelazia callipaeda
TCLT_0000083701
I
0.505
D918_08316
Trichuris suis
D918_08316
N
0.503
SS1G_05340
Sclerotinia sclerotiorum
SS1G_05340
N
0.502
PPAI009257
Phlebotomus papatasi
PPAI009257
N
0.500
ENSGMOG00000014613
Gadus morhua
ENSGMOG00000014613
N
0.500
SOX13
Felis catus
ENSFCAG00000002900
I
0.499
CPIJ012042
Culex quinquefasciatus
CPIJ012042
I
0.499
AARA005391
Anopheles arabiensis
AARA005391
I
0.499
SOX12
Sus scrofa
ENSSSCG00000021920
I
0.499
NBR_0002216901
Nippostrongylus brasiliensis
NBR_0002216901
I
0.499
CpipJ_CPIJ012042
Culex pipiens
CpipJ_CPIJ012042
I
0.499
NBR_0000360901
Nippostrongylus brasiliensis
NBR_0000360901
I
0.499
LCUP001585
Lucilia cuprina
LCUP001585
I
0.499
ENSTGUG00000002931
Taeniopygia guttata
ENSTGUG00000002931
I
0.499
AALB009868
Anopheles albimanus
AALB009868
I
0.499
ACOM022800
Anopheles coluzzii
ACOM022800
I
0.499
AMAM006332
Anopheles maculatus
AMAM006332
I
0.499
ACEP10855
Atta cephalotes
ACEP10855
I
0.499
AMEC012053
Anopheles melas
AMEC012053
I
0.499
AQUA001262
Anopheles quadriannulatus
AQUA001262
I
0.499
AMIN009301
Anopheles minimus
AMIN009301
I
0.499
AMEM014190
Anopheles merus
AMEM014190
I
0.499
MCINX002905
Melitaea cinxia
MCINX002905
I
0.499
ASTEI06407
Anopheles stephensi
ASTEI06407
I
0.499
AEPI003628
Anopheles epiroticus
AEPI003628
I
0.499
ACUA008554
Anopheles culicifacies
ACUA008554
I
0.499
BGIBMGA003080
Bombyx mori
BGIBMGA003080
I
0.499
LLOJ005525
Lutzomyia longipalpis
LLOJ005525
I
0.499
SOX17
Procavia capensis
ENSPCAG00000003188
I
0.495
SMAR010127
Strigamia maritima
SMAR010127
N
0.495
Ocbimv22020621m.g
Octopus bimaculoides
Ocbimv22020621m.g
N
0.495
KGM_05609
Danaus plexippus
KGM_05609
N
0.488
SINV16626
Solenopsis invicta
SINV16626
I
0.488
RPRC012125
Rhodnius prolixus
RPRC012125
N
0.488
ACOM026664
Anopheles coluzzii
ACOM026664
N
0.488
AFUN009319
Anopheles funestus
AFUN009319
I
0.488
ADIR009659
Anopheles dirus
ADIR009659
I
0.488
AMEC014560
Anopheles melas
AMEC014560
I
0.488
ASIS016076
Anopheles sinensis
ASIS016076
N
0.488
BGLB002734
Biomphalaria glabrata
BGLB002734
I
0.488
ACUA011783
Anopheles culicifacies
ACUA011783
N
0.488
HMEL016850
Heliconius melpomene
HMEL016850
I
0.488
Cflo_01077--XP_001122045.1_APIME
Camponotus floridanus
Cflo_01077--XP_001122045.1_APIME
N
0.488
Hsal_04214--XP_001122045.1_APIME
Harpegnathos saltator
Hsal_04214--XP_001122045.1_APIME
N
0.488
LDEC007549
Leptinotarsa decemlineata
LDEC007549
N
0.488
AARA000827
Anopheles arabiensis
AARA000827
I
0.488
YQE_13042
Dendroctonus ponderosae
YQE_13042
I
0.488
PHUM433270
Pediculus humanus
PHUM433270
N
0.488
ACEP25857
Atta cephalotes
ACEP25857
I
0.488
GB40960
Apis mellifera
GB40960
I
0.488
AGAP012033
Anopheles gambiae
AGAP012033
I
0.488
CPIJ012500
Culex quinquefasciatus
CPIJ012500
N
0.488
CpipJ_CPIJ012500
Culex pipiens
CpipJ_CPIJ012500
N
0.488
AAEL000792
Aedes aegypti
AAEL000792
I
0.488
HBP1
Homo sapiens
ENSG00000105856
D
0.485
BBX
Homo sapiens
ENSG00000114439
D
0.481
SPOG_05006
Schizosaccharomyces cryophilus
SPOG_05006
N
0.478
SPER_0000213401
Spirometra erinaceieuropaei
SPER_0000213401
N
0.476
SPU_021407
Strongylocentrotus purpuratus
SPU_021407
N
0.475
SEPMUDRAFT_152382
Sphaerulina musiva
SEPMUDRAFT_152382
N
0.475
BOTBODRAFT_575815
Botryobasidium botryosum
BOTBODRAFT_575815
N
0.474
TPHA_0C04350
Tetrapisispora phaffii
TPHA_0C04350
N
0.471
SOX9
Pteropus vampyrus
ENSPVAG00000010505
I
0.471
SOX10
Procavia capensis
ENSPCAG00000005913
I
0.471
ENSDORG00000012440
Dipodomys ordii
ENSDORG00000012440
I
0.471
ENSDORG00000003967
Dipodomys ordii
ENSDORG00000003967
I
0.471
ENSVPAG00000000908
Vicugna pacos
ENSVPAG00000000908
I
0.471
SOX10
Erinaceus europaeus
ENSEEUG00000011263
I
0.471
SOX10
Ochotona princeps
ENSOPRG00000013575
I
0.471
THITE_2010224
Thielavia terrestris
THITE_2010224
N
0.470
AATE006542
Anopheles atroparvus
AATE006542
N
0.468
AQUA004309
Anopheles quadriannulatus
AQUA004309
I
0.468
LotgiG88815
Lottia gigantea
LotgiG88815
I
0.468
ACUA026266
Anopheles culicifacies
ACUA026266
I
0.468
ENSPMAG00000010371
Petromyzon marinus
ENSPMAG00000010371
I
0.468
ISCW009925
Ixodes scapularis
ISCW009925
I
0.468
CPIJ014016
Culex quinquefasciatus
CPIJ014016
N
0.468
BGLB010904
Biomphalaria glabrata
BGLB010904
I
0.468
AMEC016085
Anopheles melas
AMEC016085
I
0.468
POSPLDRAFT_104706
Postia placenta
POSPLDRAFT_104706
N
0.468
CpipJ_CPIJ014016
Culex pipiens
CpipJ_CPIJ014016
N
0.468
ACEP25270
Atta cephalotes
ACEP25270
N
0.462
RPRC012780
Rhodnius prolixus
RPRC012780
I
0.461
sox9b
Danio rerio
ENSDARG00000043923
I
0.461
TC003791
Tribolium castaneum
TC003791
I
0.461
AARA011914
Anopheles arabiensis
AARA011914
I
0.461
XP_002935939
Xenopus tropicalis
XP_002935939
I
0.461
ENSFALG00000002572
Ficedula albicollis
ENSFALG00000002572
I
0.461
AMIN001219
Anopheles minimus
AMIN001219
I
0.461
Hsal_04828--XP_001122993.1_APIME
Harpegnathos saltator
Hsal_04828--XP_001122993.1_APIME
I
0.461
ACOM034662
Anopheles coluzzii
ACOM034662
I
0.461
GRMZM2G144398
Zea mays
GRMZM2G144398
N
0.455
XM_002306945.1
Populus trichocarpa
POPTR_0005s27390
I
0.455
PredSwiss_ASS2010_3146.2
Pneumocystis carinii
PredSwiss_ASS2010_3146.2
N
0.455
orange1.1g029982m.g
Citrus sinensis
orange1.1g029982m.g
I
0.455
estExt_fgenesh1_pg.C_90036
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_90036
N
0.455
SINV19753
Solenopsis invicta
SINV19753
I
0.452
AFUN010199
Anopheles funestus
AFUN010199
I
0.452
CLEC006961
Cimex lectularius
CLEC006961
I
0.450
Hbp1
Dipodomys ordii
ENSDORG00000010576
I
0.449
HBP1
Echinops telfairi
ENSETEG00000018542
I
0.449
ENSMEUG00000011116
Macropus eugenii
ENSMEUG00000011116
I
0.449
HBP1
Sorex araneus
ENSSARG00000007731
I
0.449
Hbp1
Mus musculus
ENSMUSG00000002996
D
0.449
Ogr19131
Ophisaurus gracilis
Ogr19131
N
0.449
ENSCPOG00000024750
Cavia porcellus
ENSCPOG00000024750
I
0.448
CpipJ_CPIJ014424
Culex pipiens
CpipJ_CPIJ014424
I
0.444
CPIJ014424
Culex quinquefasciatus
CPIJ014424
I
0.444
CADAORAG00001679
Aspergillus oryzae
CADAORAG00001679
N
0.443
ACAC_0000143401
Angiostrongylus cantonensis
ACAC_0000143401
N
0.443
Ocbimv22007316m.g
Octopus bimaculoides
Ocbimv22007316m.g
N
0.443
AMIN008219
Anopheles minimus
AMIN008219
I
0.442
AATE012157
Anopheles atroparvus
AATE012157
N
0.442
RSKR_0000394100
Rhabditophanes kr3021
RSKR_0000394100
N
0.442
BGIBMGA004367
Bombyx mori
BGIBMGA004367
I
0.442
ENSTTRG00000005878
Tursiops truncatus
ENSTTRG00000005878
I
0.442
GLOINDRAFT_339213
Rhizophagus irregularis
GLOINDRAFT_339213
N
0.440
ACHR009359
Anopheles christyi
ACHR009359
I
0.439
ENSPSIG00000009504
Pelodiscus sinensis
ENSPSIG00000009504
I
0.439
AMAM018985
Anopheles maculatus
AMAM018985
I
0.439
AEPI007946
Anopheles epiroticus
AEPI007946
N
0.439
ASTEI06129
Anopheles stephensi
ASTEI06129
N
0.439
augustus_masked-nMf.1.1.scaf12176-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf12176-processed-gene-0.0
N
0.438
HelroG148167
Helobdella robusta
HelroG148167
I
0.437
GLOINDRAFT_81724
Rhizophagus irregularis
GLOINDRAFT_81724
I
0.434
GLOINDRAFT_50485
Rhizophagus irregularis
GLOINDRAFT_50485
I
0.434
L798_02392
Zootermopsis nevadensis
L798_02392
I
0.432
ML23337a
Mnemiopsis leidyi
ML23337a
N
0.432
GPUH_0001196001
Gongylonema pulchrum
GPUH_0001196001
N
0.431
L898_g3197
Steinernema monticolum
L898_g3197
I
0.431
GPUH_0000691201
Gongylonema pulchrum
GPUH_0000691201
N
0.431
ENSMEUG00000015665
Macropus eugenii
ENSMEUG00000015665
I
0.427
DAPPUDRAFT_37735
Daphnia pulex
DAPPUDRAFT_37735
I
0.427
EFV48447
Trichinella spiralis
EFV48447
I
0.426
ENSPTRG00000005969
Pan troglodytes
ENSPTRG00000005969
I
0.423
SOX10
Meleagris gallopavo
ENSMGAG00000012508
I
0.423
Gfo_R009506
Geospiza fortis
Gfo_R009506
I
0.423
ENSLOCG00000004648
Lepisosteus oculatus
ENSLOCG00000004648
I
0.420
RO3G_05566
Rhizopus oryzae
RO3G_05566
N
0.420
PPAI008595
Phlebotomus papatasi
PPAI008595
N
0.420
GH23191
Drosophila grimshawi
FBgn0130648
N
0.419
M404DRAFT_79773
Pisolithus tinctorius
M404DRAFT_79773
N
0.418
PHACADRAFT_58554
Phanerochaete carnosa
PHACADRAFT_58554
N
0.418
MPER_07337
Moniliophthora perniciosa
MPER_07337
N
0.418
TRIVIDRAFT_52649
Trichoderma virens
TRIVIDRAFT_52649
N
0.417
GLYMA01G28253
Glycine max
GLYMA01G28253
N
0.416