CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLOINDRAFT_320919
(
Rhizophagus irregularis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
GLOINDRAFT_320919
T330091_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ESA18259
Sox
39
103
PPRSPNRFILYRKHIQNRINTDPNNPANMRDLSKMVARMWEKEPPEIKQYWDQEAERTKLNSSYR
Links
Other
Sox
family TFs
Other
Rhizophagus irregularis
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
THITE_2010224
Thielavia terrestris
THITE_2010224
N
0.477
CADAORAG00001679
Aspergillus oryzae
CADAORAG00001679
N
0.477
SS1G_05340
Sclerotinia sclerotiorum
SS1G_05340
N
0.470
estExt_fgenesh1_pg.C_90036
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_90036
N
0.447
GLOINDRAFT_11295
Rhizophagus irregularis
GLOINDRAFT_11295
N
0.437
GLOINDRAFT_34686
Rhizophagus irregularis
GLOINDRAFT_34686
N
0.430