CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLOINDRAFT_330944
(
Rhizophagus irregularis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
GLOINDRAFT_330944
T330107_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ERZ96020
Sox
66
131
PSRSPNAFLIYRRVFVQLLKAHNYAFKMTDVSSMASARWKDEPEHVKREYLVIAGEAKTMLTTTRH
Links
Other
Sox
family TFs
Other
Rhizophagus irregularis
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLOINDRAFT_14813
Rhizophagus irregularis
GLOINDRAFT_14813
N
0.518
GLOINDRAFT_27042
Rhizophagus irregularis
GLOINDRAFT_27042
N
0.511
GLOINDRAFT_25683
Rhizophagus irregularis
GLOINDRAFT_25683
N
0.495
GLOINDRAFT_349586
Rhizophagus irregularis
GLOINDRAFT_349586
N
0.494
GLOINDRAFT_92937
Rhizophagus irregularis
GLOINDRAFT_92937
N
0.494
GLOINDRAFT_22824
Rhizophagus irregularis
GLOINDRAFT_22824
N
0.472
GLOINDRAFT_347592
Rhizophagus irregularis
GLOINDRAFT_347592
N
0.472
GLOINDRAFT_34686
Rhizophagus irregularis
GLOINDRAFT_34686
N
0.469
GLOINDRAFT_347004
Rhizophagus irregularis
GLOINDRAFT_347004
N
0.463
GLOINDRAFT_339213
Rhizophagus irregularis
GLOINDRAFT_339213
N
0.460
GLOINDRAFT_342377
Rhizophagus irregularis
GLOINDRAFT_342377
N
0.457
GLOINDRAFT_11295
Rhizophagus irregularis
GLOINDRAFT_11295
N
0.455
GLOINDRAFT_346927
Rhizophagus irregularis
GLOINDRAFT_346927
N
0.440
GLOINDRAFT_15083
Rhizophagus irregularis
GLOINDRAFT_15083
N
0.437
GLOINDRAFT_21291
Rhizophagus irregularis
GLOINDRAFT_21291
N
0.434
GLOINDRAFT_36163
Rhizophagus irregularis
GLOINDRAFT_36163
N
0.432
GLOINDRAFT_319204
Rhizophagus irregularis
GLOINDRAFT_319204
N
0.430
GLOINDRAFT_374
Rhizophagus irregularis
GLOINDRAFT_374
N
0.425
GLOINDRAFT_13510
Rhizophagus irregularis
GLOINDRAFT_13510
N
0.425
GLOINDRAFT_33465
Rhizophagus irregularis
GLOINDRAFT_33465
N
0.423
GLOINDRAFT_16563
Rhizophagus irregularis
GLOINDRAFT_16563
N
0.421
GLOINDRAFT_17166
Rhizophagus irregularis
GLOINDRAFT_17166
N
0.421
GLOINDRAFT_344841
Rhizophagus irregularis
GLOINDRAFT_344841
N
0.420
GLOINDRAFT_342407
Rhizophagus irregularis
GLOINDRAFT_342407
N
0.419