CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLOINDRAFT_33320
(
Rhizophagus irregularis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
GLOINDRAFT_33320
T330108_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ESA07097
Sox
94
129
FAQVASVMWNEASQEDRDKYKELSLELKRLQINCHK
ESA07097
Sox
282
318
FTQVASEMWIKASQKDRENYKELASELKKLQINFHKD
Links
Other
Sox
family TFs
Other
Rhizophagus irregularis
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GPUH_0001439101
Gongylonema pulchrum
GPUH_0001439101
N
0.500
VDBG_09577
Verticillium alfalfae
VDBG_09577
N
0.483
VDBG_09577
Verticillium albo atrum
VDBG_09577
N
0.483
DAPPUDRAFT_323625
Daphnia pulex
DAPPUDRAFT_323625
N
0.457