GLOINDRAFT_338425 (Rhizophagus irregularis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 GLOINDRAFT_338425 T330118_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
INO
M02485_2.00
Arabidopsis thaliana
NHNNNYRNNN

NNNYRNNNDN
PBM
Weirauch et al.(2014)
pTH7516
0.421 0.306
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ESA00635 Sox 1 49

Links

Other Sox family TFs
Other Rhizophagus irregularis TFs

92 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GLOINDRAFT_337448 Rhizophagus irregularis GLOINDRAFT_337448 I 0.518
GLOINDRAFT_342259 Rhizophagus irregularis GLOINDRAFT_342259 I 0.517
SPPG_01639 Spizellomyces punctatus SPPG_01639 I 0.511
GLOINDRAFT_334763 Rhizophagus irregularis GLOINDRAFT_334763 I 0.508
AMAG_00993 Allomyces macrogynus AMAG_00993 I 0.479
GLOINDRAFT_347422 Rhizophagus irregularis GLOINDRAFT_347422 I 0.476
AMAG_02504 Allomyces macrogynus AMAG_02504 I 0.473
E5Q_04236 Mixia osmundae E5Q_04236 I 0.463
E5Q_04235 Mixia osmundae E5Q_04235 I 0.463
PILCRDRAFT_822980 Piloderma croceum PILCRDRAFT_822980 I 0.459
PDK_20s1781371g001 Phoenix dactylifera PDK_20s1781371g001 I 0.459
Cla010239 Citrullus lanatus Cla010239 I 0.459
GUITHDRAFT_146350 Guillardia theta GUITHDRAFT_146350 I 0.456
GRMZM2G046829 Zea mays GRMZM2G046829 I 0.452
K437DRAFT_256012 Tilletiaria anomala K437DRAFT_256012 I 0.451
cassava26804.m1 Manihot esculenta cassava26804.m1 I 0.450
GSMUA_Achr4G31310_001 Musa acuminata GSMUA_Achr4G31310_001 I 0.450
GALMADRAFT_234655 Galerina marginata GALMADRAFT_234655 N 0.443
GSMUA_Achr3G25660_001 Musa acuminata GSMUA_Achr3G25660_001 I 0.440
GSMUA_Achr4G22750_001 Musa acuminata GSMUA_Achr4G22750_001 I 0.440
SPPG_09438 Spizellomyces punctatus SPPG_09438 I 0.440
DACRYDRAFT_54873 Dacryopinax sp DACRYDRAFT_54873 I 0.439
K443DRAFT_87716 Laccaria amethystina K443DRAFT_87716 N 0.437
GUITHDRAFT_163519 Guillardia theta GUITHDRAFT_163519 I 0.435
M407DRAFT_126438 Tulasnella calospora M407DRAFT_126438 I 0.433
LACBIDRAFT_301226 Laccaria bicolor LACBIDRAFT_301226 N 0.433
BATDEDRAFT_7789 Batrachochytrium dendrobatidis BATDEDRAFT_7789 I 0.430
M422DRAFT_175451 Sphaerobolus stellatus M422DRAFT_175451 I 0.429
EMIHUDRAFT_98817 Emiliania huxleyi EMIHUDRAFT_98817 I 0.427
GSMUA_Achr5G23610_001 Musa acuminata GSMUA_Achr5G23610_001 I 0.427
EMIHUDRAFT_114782 Emiliania huxleyi EMIHUDRAFT_114782 I 0.427
cassava41595.m1 Manihot esculenta cassava41595.m1 I 0.425
Cucsa.394330 Cucumis sativus Cucsa.394330 I 0.425
mgf023167m Mimulus guttatus mgf023167m I 0.425
AZW_EuGene.0200010417 Micromonas sp RCC299 AZW_EuGene.0200010417 I 0.425
cassava27370.m1 Manihot esculenta cassava27370.m1 I 0.425
Pm006709 Prunus mume Pm006709 I 0.425
POPTR_0008s19330 Populus trichocarpa POPTR_0008s19330 I 0.425
PRUPE_ppa023883mg Prunus persica PRUPE_ppa023883mg I 0.425
INO Vitis vinifera VIT_01s0127g00330 I 0.425
Cla000824 Citrullus lanatus Cla000824 I 0.425
Lus10013028.g Linum usitatissimum Lus10013028.g I 0.425
Lus10029135.g Linum usitatissimum Lus10029135.g I 0.425
SapurV1A.0069s0070 Salix purpurea SapurV1A.0069s0070 I 0.425
SapurV1A.0269s0230 Salix purpurea SapurV1A.0269s0230 I 0.425
chr2.CM0008.270.nc Lotus japonicus chr2.CM0008.270.nc I 0.425
GLYMA08G39290 Glycine max GLYMA08G39290 I 0.425
orange1.1g037247m.g Citrus sinensis orange1.1g037247m.g I 0.425
GLYMA04G10125 Glycine max GLYMA04G10125 I 0.425
POPTR_0010s05220 Populus trichocarpa POPTR_0010s05220 I 0.425
GLYMA18G19720 Glycine max GLYMA18G19720 I 0.425
MDP0000126221 Malus domestica MDP0000126221 I 0.425
MDP0000263713 Malus domestica MDP0000263713 I 0.425
GLYMA06G10110 Glycine max GLYMA06G10110 I 0.425
UM06001 Ustilago maydis UM06001 I 0.422
UHOR_08529 Ustilago hordei UHOR_08529 I 0.422
PaG_05633 Pseudozyma aphidis PaG_05633 I 0.422
PAN0_018d5604 Pseudozyma antarctica PAN0_018d5604 I 0.422
LPERR07G16630 Leersia perrieri LPERR07G16630 I 0.421
Bra024599 Brassica rapa Bra024599 I 0.421
evm.TU.supercontig_69.72 Carica papaya evm.TU.supercontig_69.72 I 0.421
Bostr.12659s0203 Boechera stricta Bostr.12659s0203 I 0.421
Carubv10012024m.g Capsella rubella Carubv10012024m.g I 0.421
INO Arabidopsis lyrata fgenesh1_pg.C_scaffold_1002152 I 0.421
Cagra.0605s0067 Capsella grandiflora Cagra.0605s0067 I 0.421
GSMUA_Achr8G04750_001 Musa acuminata GSMUA_Achr8G04750_001 I 0.421
GSMUA_Achr6G31080_001 Musa acuminata GSMUA_Achr6G31080_001 I 0.421
AMTR_s00096p00054100 Amborella trichopoda AMTR_s00096p00054100 I 0.421
Thhalv10008669m.g Eutrema salsugineum Thhalv10008669m.g I 0.421
GSMUA_Achr7G07830_001 Musa acuminata GSMUA_Achr7G07830_001 I 0.421
Bo5g039580 Brassica oleracea Bo5g039580 I 0.421
GSMUA_Achr8G26600_001 Musa acuminata GSMUA_Achr8G26600_001 I 0.421
Bra012373 Brassica rapa Bra012373 I 0.421
BGIOSGA025976 Oryza indica BGIOSGA025976 I 0.421
Bo7g056180 Brassica oleracea Bo7g056180 I 0.421
ORGLA07G0250200 Oryza glaberrima ORGLA07G0250200 I 0.421
Ca_21472 Cicer arietinum Ca_21472 I 0.421
VIT_08s0032g01110 Vitis vinifera VIT_08s0032g01110 I 0.421
GSMUA_Achr3G15060_001 Musa acuminata GSMUA_Achr3G15060_001 I 0.421
OMERI07G16070 Oryza meridionalis OMERI07G16070 I 0.421
OB07G25220 Oryza brachyantha OB07G25220 I 0.421
MTR_5g034030 Medicago truncatula MTR_5g034030 I 0.421
Solyc05g005240.1 Solanum lycopersicum Solyc05g005240.1 I 0.421
OLONG_001420 Oryza longistaminata OLONG_001420 I 0.421
INO Arabidopsis thaliana AT1G23420 D 0.421
sr16632 Sporisorium reilianum sr16632 I 0.417
EuGene.0000040541 Micromonas pusilla EuGene.0000040541 I 0.417
e_gw1.1.2342.1 Heterobasidion annosum e_gw1.1.2342.1 I 0.416
HETIRDRAFT_308278 Heterobasidion irregulare HETIRDRAFT_308278 I 0.416
Lus10024603.g Linum usitatissimum Lus10024603.g I 0.415
Lus10032240.g Linum usitatissimum Lus10032240.g I 0.415
SapurV1A.0248s0170 Salix purpurea SapurV1A.0248s0170 I 0.415