TF Information

GLOINDRAFT_50485 *(Rhizophagus irregularis)* Sox
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00505 (HMG_box)	IPR000910	GLOINDRAFT_50485	T330184_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
mat1-Mc M11340_2.00	Schizosaccharomyces pombe	NRMNNAACAAAGAVRYMW	AKRYBTCTTTGTTNNKYN	Transfac Matys et al.(2006) F$MAT1MC_01	0.511	0.493
mat1-Mc M11341_2.00	Schizosaccharomyces pombe	YYHATTGTYD	HRACAATDRR	Transfac Matys et al.(2006) F$MAT1MC_02	0.511	0.493
fmf-1 M02491_2.00	Neurospora crassa	TCTTTGTY	RACAAAGA	PBM Weirauch et al.(2014) pTH8941	0.436	0.358
ROX1 M00070_2.00	Saccharomyces cerevisiae	NRAACAATWNN	NNWATTGTTYN	PBM Badis et al.(2008) ROX1_2099	0.417	0.373
ROX1 M07498_2.00	Saccharomyces cerevisiae	YYHATTGTTYTS	SARAACAATDRR	PBM, CSA and or DIP-chip Mathelier et al.(2014) MA0371.1	0.417	0.373
ROX1 M08607_2.00	Saccharomyces cerevisiae	BYATTGTN	NACAATRV	Misc DeBoer et al.(2011) YPR065W_1396	0.417	0.373
ROX1 M11346_2.00	Saccharomyces cerevisiae	Transfac license required	Transfac license required	Transfac Matys et al.(2006) F$ROX1_Q6_01	0.417	0.373
ROX1 M11347_2.00	Saccharomyces cerevisiae	Transfac license required	Transfac license required	Transfac Matys et al.(2006) F$ROX1_Q6	0.417	0.373
For this family, TFs with SR scores > 0.415* will likely have a similar motif*