CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLOTRDRAFT_119701
(
Gloeophyllum trabeum
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
GLOTRDRAFT_119701
T330231_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPQ59713
Sox
97
165
PKRPASSYLLFQNEIRRAIQEQNPTMPNSELLKEISRRWKELSPQDKEVYEQRTRDQKAKYDIAKAAYD
Links
Other
Sox
family TFs
Other
Gloeophyllum trabeum
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PILCRDRAFT_819051
Piloderma croceum
PILCRDRAFT_819051
N
0.602
M413DRAFT_292945
Hebeloma cylindrosporum
M413DRAFT_292945
N
0.564
CC1G_11400
Coprinopsis cinerea
CC1G_11400
N
0.560
JAAARDRAFT_96982
Jaapia argillacea
JAAARDRAFT_96982
N
0.555
GALMADRAFT_227586
Galerina marginata
GALMADRAFT_227586
N
0.542
AGABI2DRAFT_191645
Agaricus bisporus
AGABI2DRAFT_191645
N
0.532
e_gwh2.2.1019.1
Phanerochaete chrysosporium
e_gwh2.2.1019.1
N
0.525
PHACADRAFT_250106
Phanerochaete carnosa
PHACADRAFT_250106
N
0.525
M378DRAFT_22958
Amanita muscaria
M378DRAFT_22958
N
0.524
FOMPIDRAFT_1116461
Fomitopsis pinicola
FOMPIDRAFT_1116461
N
0.519
K443DRAFT_167654
Laccaria amethystina
K443DRAFT_167654
N
0.498
PHLGIDRAFT_91671
Phlebiopsis gigantea
PHLGIDRAFT_91671
N
0.497
BN946_scf185043.g242
Trametes cinnabarina
BN946_scf185043.g242
N
0.491
CERSUDRAFT_111715
Ceriporiopsis subvermispora
CERSUDRAFT_111715
N
0.475
POSPLDRAFT_104147
Postia placenta
POSPLDRAFT_104147
N
0.455
LACBIDRAFT_294914
Laccaria bicolor
LACBIDRAFT_294914
N
0.450
L804_03290
Cryptococcus gattii
L804_03290
N
0.441
CNE04220
Cryptococcus neoformans
CNE04220
N
0.441
SERLA73DRAFT_131740
Serpula lacrymans
SERLA73DRAFT_131740
I
0.437
BOTBODRAFT_90657
Botryobasidium botryosum
BOTBODRAFT_90657
N
0.431
AABR07009373.1
Rattus norvegicus
ENSRNOG00000011429
I
0.430
FIBRA_06118
Fibroporia radiculosa
FIBRA_06118
N
0.422
MVLG_07162
Microbotryum violaceum
MVLG_07162
I
0.418
estExt_fgeneshTM_pg.C_110237
Tremella mesenterica
estExt_fgeneshTM_pg.C_110237
N
0.417
M408DRAFT_53001
Serendipita vermifera
M408DRAFT_53001
N
0.417
M408DRAFT_54305
Serendipita vermifera
M408DRAFT_54305
N
0.417