GLYMA13G05140 (Glycine max)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 GLYMA13G05140 T330289_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NHP6A
M01566_2.00 		Saccharomyces cerevisiae
NHRYWWWN
NWWWRYDN		 PBM
Zhu et al.(2009)
Nhp6a 		0.429 0.537
NHP6A
M08606_2.00 		Saccharomyces cerevisiae
DNDHNNWTATATADWRDNNDN
NHNNHYWHTATATAWNNDHNH		 Misc
DeBoer et al.(2011)
YPR052C_879 		0.429 0.537
NHP6B
M01565_2.00 		Saccharomyces cerevisiae
NNWHWRYDNN
NNHRYWDWNN		 PBM
Zhu et al.(2009)
Nhp6b 		0.422 0.507
NHP6B
M08603_2.00 		Saccharomyces cerevisiae
HNTHHNWWTATAWWWWRNDN
NHNYWWWWTATAWWNDDAND		 Misc
DeBoer et al.(2011)
YBR089C-A_792 		0.422 0.507
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA13G05140.2 Sox 466 532

Links

Other Sox family TFs
Other Glycine max TFs

251 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
chr2.CM0225.40.nc Lotus japonicus chr2.CM0225.40.nc I 0.630
LjSGA_094514.1 Lotus japonicus LjSGA_094514.1 I 0.630
Ca_12487 Cicer arietinum Ca_12487 I 0.623
PK18077.1 Cannabis sativa PK18077.1 I 0.616
Ca_10804 Cicer arietinum Ca_10804 I 0.613
MTR_1g022345 Medicago truncatula MTR_1g022345 I 0.613
Cla017295 Citrullus lanatus Cla017295 I 0.603
Cucsa.339070 Cucumis sativus Cucsa.339070 I 0.603
GLYMA03G03771 Glycine max GLYMA03G03771 N 0.590
mgf001267m Mimulus guttatus mgf001267m I 0.588
gene01264-v1.0-hybrid Fragaria vesca gene01264-v1.0-hybrid I 0.585
gene01265-v1.0-hybrid Fragaria vesca gene01265-v1.0-hybrid I 0.585
GLYMA01G33240 Glycine max GLYMA01G33240 I 0.583
Pm015842 Prunus mume Pm015842 I 0.580
PRUPE_ppa002690mg Prunus persica PRUPE_ppa002690mg I 0.580
MDP0000828844 Malus domestica MDP0000828844 I 0.574
TCM_018380 Theobroma cacao TCM_018380 I 0.571
SJAG_03603 Schizosaccharomyces japonicus SJAG_03603 I 0.570
GSMUA_Achr2G19630_001 Musa acuminata GSMUA_Achr2G19630_001 I 0.558
AMTR_s00078p00107740 Amborella trichopoda AMTR_s00078p00107740 I 0.558
estExt_fgeneshPB_pg.C_360007 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_360007 I 0.555
Ciclev10011266m.g Citrus clementina Ciclev10011266m.g I 0.542
MDP0000310093 Malus domestica MDP0000310093 I 0.542
orange1.1g006512m.g Citrus sinensis orange1.1g006512m.g I 0.542
ATHMG Vitis vinifera VIT_14s0108g00040 I 0.534
RO3G_07751 Rhizopus oryzae RO3G_07751 I 0.530
MDP0000301546 Malus domestica MDP0000301546 I 0.527
Thhalv10003803m.g Eutrema salsugineum Thhalv10003803m.g I 0.527
evm.TU.supercontig_211.6 Carica papaya evm.TU.supercontig_211.6 I 0.525
SSRP1 Arabidopsis thaliana AT3G28730 I 0.522
Carubv10016819m.g Capsella rubella Carubv10016819m.g I 0.522
Cagra.0535s0005 Capsella grandiflora Cagra.0535s0005 I 0.522
SOCG_02294 Schizosaccharomyces octosporus SOCG_02294 I 0.517
SPOG_00531 Schizosaccharomyces cryophilus SPOG_00531 I 0.515
PGSC0003DMG400001414 Solanum tuberosum PGSC0003DMG400001414 I 0.512
Solyc02g087710.2 Solanum lycopersicum Solyc02g087710.2 I 0.512
M407DRAFT_81488 Tulasnella calospora M407DRAFT_81488 I 0.512
PGSC0003DMG400018099 Solanum tuberosum PGSC0003DMG400018099 I 0.512
PDK_20s1437671g003 Phoenix dactylifera PDK_20s1437671g003 I 0.510
cassava42041.valid.m1 Manihot esculenta cassava42041.valid.m1 I 0.499
e_gw1.1.2450.1 Mucor circinelloides e_gw1.1.2450.1 I 0.497
estExt_Genewise1Plus.C_11422 Mucor circinelloides estExt_Genewise1Plus.C_11422 I 0.496
MTR_5g082570 Medicago truncatula MTR_5g082570 I 0.495
mgf024995m Mimulus guttatus mgf024995m I 0.494
Bostr.0556s0524 Boechera stricta Bostr.0556s0524 I 0.493
ATHMG Arabidopsis lyrata scaffold_500854.1 I 0.493
PICST_23779 Scheffersomyces stipitis PICST_23779 I 0.490
29822.m003476 Ricinus communis 29822.m003476 I 0.490
gww1.1.1.1342.1 Pichia stipitis gww1.1.1.1342.1 I 0.490
BATDEDRAFT_89692 Batrachochytrium dendrobatidis BATDEDRAFT_89692 I 0.490
TPHA_0A03740 Tetrapisispora phaffii TPHA_0A03740 I 0.488
Kpol_1065p34 Vanderwaltozyma polyspora Kpol_1065p34 I 0.488
mgf012563m Mimulus guttatus mgf012563m I 0.487
MDP0000165147 Malus domestica MDP0000165147 N 0.486
Gorai.006G024900 Gossypium raimondii Gorai.006G024900 I 0.481
estExt_Genewise1.C_20300 Phycomyces blakesleeanus estExt_Genewise1.C_20300 I 0.481
RO3G_04704 Rhizopus oryzae RO3G_04704 I 0.476
Ecym_7459 Eremothecium cymbalariae Ecym_7459 I 0.470
AGOS_ADL310W Ashbya gossypii AGOS_ADL310W I 0.470
AACERI_AaceriADL310W Saccharomycetaceae sp ashbya aceri AACERI_AaceriADL310W I 0.470
nhp6 Schizosaccharomyces pombe SPAC57A10.09c I 0.468
GNLVRS01_PISO0N04523g Millerozyma farinosa GNLVRS01_PISO0N04523g I 0.463
CPAG_02417 Candida parapsilosis CPAG_02417 I 0.463
Bra033055 Brassica rapa Bra033055 N 0.463
Kpol_376p1 Vanderwaltozyma polyspora Kpol_376p1 I 0.463
CORT_0E02670 Candida orthopsilosis CORT_0E02670 I 0.463
gw1.199.74.1 Physcomitrella patens gw1.199.74.1 I 0.461
TPHA_0M01480 Tetrapisispora phaffii TPHA_0M01480 I 0.460
estExt_Genewise1.C_130158 Chlorella vulgaris estExt_Genewise1.C_130158 I 0.457
DEHA2D17710g Debaryomyces hansenii DEHA2D17710g I 0.457
SPAPADRAFT_62621 Spathaspora passalidarum SPAPADRAFT_62621 I 0.457
estExt_fgenesh1_pm.C_130068 Coccomyxa subellipsoidea C169 estExt_fgenesh1_pm.C_130068 I 0.457
GNLVRS01_PISO0M04390g Millerozyma farinosa GNLVRS01_PISO0M04390g I 0.457
CD36_41610 Candida dubliniensis CD36_41610 I 0.457
SCHCODRAFT_76744 Schizophyllum commune SCHCODRAFT_76744 I 0.455
KNAG_0H00800 Kazachstania naganishii KNAG_0H00800 I 0.455
MVLG_07162 Microbotryum violaceum MVLG_07162 I 0.453
BGIOSGA023639 Oryza indica BGIOSGA023639 I 0.453
HYDPIDRAFT_138070 Hydnomerulius pinastri HYDPIDRAFT_138070 I 0.452
HPODL_03671 Ogataea parapolymorpha HPODL_03671 I 0.450
NDAI_0A05290 Naumovozyma dairenensis NDAI_0A05290 I 0.448
Scas_Contig667.17 Saccharomyces castellii Scas_Contig667.17 I 0.448
NCAS_0A11010 Naumovozyma castellii NCAS_0A11010 I 0.448
PLICRDRAFT_46399 Plicaturopsis crispa PLICRDRAFT_46399 I 0.446
PHACADRAFT_164552 Phanerochaete carnosa PHACADRAFT_164552 I 0.444
Moror_35 Moniliophthora roreri Moror_35 I 0.444
nhp6 Dictyostelium discoideum DDB_G0270260 N 0.443
M404DRAFT_63984 Pisolithus tinctorius M404DRAFT_63984 I 0.443
PAXRUDRAFT_828263 Paxillus rubicundulus PAXRUDRAFT_828263 I 0.443
CY34DRAFT_810312 Suillus luteus CY34DRAFT_810312 I 0.443
fgenesh1_pg.C_scaffold_9000255 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_9000255 I 0.442
fgeneshDP_kg.C_scaffold_625000001 Dictyostelium purpureum fgeneshDP_kg.C_scaffold_625000001 I 0.441
Aquca_002_00505 Aquilegia coerulea Aquca_002_00505 I 0.441
SELMODRAFT_8183 Selaginella moellendorffii SELMODRAFT_8183 I 0.441
EFA82179.1 Polysphondylium pallidum EFA82179.1 I 0.441
SELMODRAFT_29503 Selaginella moellendorffii SELMODRAFT_29503 I 0.441
CIMG_03667 Coccidioides immitis CIMG_03667 I 0.440
fgenesh1_pg.00866_#_414 Aspergillus carbonarius fgenesh1_pg.00866_#_414 I 0.440
PV04_08099 Capronia semiimmersa PV04_08099 I 0.440
Z517_03232 Fonsecaea pedrosoi Z517_03232 I 0.440
VHEMI02691 Torrubiella hemipterigena VHEMI02691 I 0.440
THITE_126111 Thielavia terrestris THITE_126111 I 0.440
PV05_08806 Exophiala xenobiotica PV05_08806 I 0.440
fgenesh3_kg.24__2__378_3_CCSY Neurospora discreta fgenesh3_kg.24__2__378_3_CCSY I 0.440
Z518_06904 Rhinocladiella mackenziei Z518_06904 I 0.440
PV11_07328 Exophiala sideris PV11_07328 I 0.440
Z519_01307 Cladophialophora bantiana Z519_01307 I 0.440
PVAR5_3907 Byssochlamys spectabilis PVAR5_3907 I 0.440
PV10_02644 Exophiala mesophila PV10_02644 I 0.440
PV08_09792 Exophiala spinifera PV08_09792 I 0.440
UREG_07427 Uncinocarpus reesii UREG_07427 I 0.440
PV07_11822 Cladophialophora immunda PV07_11822 I 0.440
NCU09995 Neurospora crassa NCU09995 I 0.440
PV06_10198 Exophiala oligosperma PV06_10198 I 0.440
PODANS_1_14230 Podospora anserina PODANS_1_14230 I 0.440
A1O5_02172 Cladophialophora psammophila A1O5_02172 I 0.440
A1O7_07623 Cladophialophora yegresii A1O7_07623 I 0.440
CPC735_006120 Coccidioides posadasii CPC735_006120 I 0.440
NEUTE1DRAFT_118965 Neurospora tetrasperma NEUTE1DRAFT_118965 I 0.440
MYCTH_2296547 Myceliophthora thermophila MYCTH_2296547 I 0.440
CADANGAG00002256 Aspergillus niger CADANGAG00002256 I 0.440
G647_02460 Cladophialophora carrionii G647_02460 I 0.440
GGTG_09659 Gaeumannomyces graminis GGTG_09659 I 0.440
BBA_04234 Beauveria bassiana BBA_04234 I 0.440
MAPG_02686 Magnaporthe poae MAPG_02686 I 0.440
PNEG_03347 Pneumocystis murina PNEG_03347 I 0.439
MPER_13045 Moniliophthora perniciosa MPER_13045 I 0.438
MELLADRAFT_31192 Melampsora laricipopulina MELLADRAFT_31192 I 0.438
FOMPIDRAFT_1026139 Fomitopsis pinicola FOMPIDRAFT_1026139 I 0.438
YALI0_C11671g Yarrowia lipolytica YALI0_C11671g I 0.437
BN946_scf184999.g62 Trametes cinnabarina BN946_scf184999.g62 I 0.437
CC1G_11882 Coprinopsis cinerea CC1G_11882 I 0.437
TBLA_0I02240 Tetrapisispora blattae TBLA_0I02240 I 0.435
AFUA_3G11610 Aspergillus fumigatus CADAFUAG00005351 I 0.434
ACLA_039500 Aspergillus clavatus CADACLAG00003509 I 0.434
CHGG_02718 Chaetomium globosum CHGG_02718 I 0.434
fgeneshDP_kg.C_scaffold_93000006 Dictyostelium purpureum fgeneshDP_kg.C_scaffold_93000006 I 0.434
NFIA_065700 Neosartorya fischeri CADNFIAG00006255 I 0.434
ANIA_02885 Aspergillus nidulans CADANIAG00010204 I 0.434
CCM_02275 Cordyceps militaris CCM_02275 I 0.434
TRIVIDRAFT_217092 Trichoderma virens TRIVIDRAFT_217092 I 0.433
UCREL1_7266 Eutypa lata UCREL1_7266 I 0.433
UCRPA7_2040 Togninia minima UCRPA7_2040 I 0.433
TRIREDRAFT_3007 Trichoderma reesei TRIREDRAFT_3007 I 0.433
TRIATDRAFT_259074 Trichoderma atroviride TRIATDRAFT_259074 I 0.433
CSUB01_03820 Colletotrichum sublineola CSUB01_03820 I 0.433
S40288_08316 Stachybotrys chartarum S40288_08316 I 0.433
HMPREF1120_01828 Exophiala dermatitidis HMPREF1120_01828 I 0.433
fgenesh1_kg.sca_1_chr1_3_0000051 Nectria haematococca fgenesh1_kg.sca_1_chr1_3_0000051 I 0.433
VDAG_03330 Verticillium dahliae VDAG_03330 I 0.433
FOXG_00672 Fusarium oxysporum FOXG_00672 I 0.433
PFICI_00741 Pestalotiopsis fici PFICI_00741 I 0.433
FPSE_00047 Fusarium pseudograminearum FPSE_00047 I 0.433
GLRG_04072 Colletotrichum graminicola GLRG_04072 I 0.433
FGRRES_00385 Fusarium graminearum FGRRES_00385 I 0.433
VDBG_06173 Verticillium alfalfae VDBG_06173 I 0.433
HCBG_06756 Histoplasma capsulatum HCBG_06756 I 0.433
FFUJ_00897 Fusarium fujikuroi FFUJ_00897 I 0.433
VDBG_06173 Verticillium albo atrum VDBG_06173 I 0.433
HMPREF1624_01793 Sporothrix schenckii HMPREF1624_01793 I 0.433
CFIO01_02023 Colletotrichum fioriniae CFIO01_02023 I 0.433
CGGC5_4927 Colletotrichum gloeosporioides CGGC5_4927 I 0.433
OCS_02580 Ophiocordyceps sinensis OCS_02580 I 0.433
NechaG73395 Fusarium solani NechaG73395 I 0.433
S40285_00704 Stachybotrys chlorohalonata S40285_00704 I 0.433
ACRE_009770 Acremonium chrysogenum ACRE_009770 I 0.433
SPBR_08754 Sporothrix brasiliensis SPBR_08754 I 0.433
FVEG_00840 Fusarium verticillioides FVEG_00840 I 0.433
Cob_05549 Colletotrichum orbiculare Cob_05549 I 0.433
CH063_13936 Colletotrichum higginsianum CH063_13936 I 0.433
OIDMADRAFT_53375 Oidiodendron maius OIDMADRAFT_53375 I 0.433
CMQ_4428 Grosmannia clavigera CMQ_4428 I 0.431
M7I_4892 Glarea lozoyensis M7I_4892 I 0.431
CADAFLAG00002475 Aspergillus flavus CADAFLAG00002475 I 0.431
EURHEDRAFT_457143 Aspergillus ruber EURHEDRAFT_457143 I 0.431
SPPG_05251 Spizellomyces punctatus SPPG_05251 I 0.429
SAKL0B07150g Lachancea kluyveri SAKL0B07150g I 0.429
KLTH0E14850g Kluyveromyces thermotolerans KLTH0E14850g I 0.429
22477_YPR052C Saccharomyces mikatae 22477_YPR052C I 0.429
25751_YPR052C Saccharomyces bayanus 25751_YPR052C I 0.429
CAGL0H08541g Candida glabrata CAGL0H08541g I 0.429
DOTSEDRAFT_74007 Dothistroma septosporum DOTSEDRAFT_74007 I 0.429
Scas_Contig718.17 Saccharomyces castellii Scas_Contig718.17 I 0.429
Kwal_12539 Kluyveromyces waltii Kwal_12539 I 0.429
ZBAI_05520 Zygosaccharomyces bailii ZBAI_05520 I 0.429
KLTH0E14850g Lachancea thermotolerans KLTH0E14850g I 0.429
SU7_3651 Saccharomyces arboricola SU7_3651 I 0.429
TDEL_0C04750 Torulaspora delbrueckii TDEL_0C04750 I 0.429
LALA0_S09e03686g Lachancea lanzarotensis LALA0_S09e03686g I 0.429
SKUD_180604 Saccharomyces kudriavzevii SKUD_180604 I 0.429
NCAS_0I01260 Naumovozyma castellii NCAS_0I01260 I 0.429
PV09_01265 Verruconis gallopava PV09_01265 I 0.429
KAFR_0G01620 Kazachstania africana KAFR_0G01620 I 0.429
KLLA0_B12056g Kluyveromyces lactis KLLA0_B12056g I 0.429
ZYRO0C15752g Zygosaccharomyces rouxii ZYRO0C15752g I 0.429
ZBAI_00368 Zygosaccharomyces bailii ZBAI_00368 I 0.429
NHP6A Saccharomyces cerevisiae YPR052C D 0.429
M438DRAFT_311243 Aureobasidium pullulans M438DRAFT_311243 I 0.428
M437DRAFT_40541 Aureobasidium melanogenum M437DRAFT_40541 I 0.428
BDDG_06343 Blastomyces dermatitidis BDDG_06343 I 0.427
CTHT_0010300 Chaetomium thermophilum CTHT_0010300 I 0.427
PABG_02251 Paracoccidioides brasiliensis PABG_02251 I 0.427
mgf006762m Mimulus guttatus mgf006762m N 0.427
V499_06692 Pseudogymnoascus pannorum V499_06692 I 0.427
PAAG_01986 Paracoccidioides sp lutzii PAAG_01986 I 0.427
GMDG_00086 Pseudogymnoascus destructans GMDG_00086 I 0.427
A1Q1_01571 Trichosporon asahii A1Q1_01571 I 0.427
TGME49_010410 Toxoplasma gondii TGME49_010410 I 0.426
NCLIV_043670 Neospora caninum NCLIV_043670 I 0.426
Pc13g09020 Penicillium chrysogenum Pc13g09020 I 0.425
PDIP_30290 Penicillium digitatum PDIP_30290 I 0.425
EMIHUDRAFT_252069 Emiliania huxleyi EMIHUDRAFT_252069 N 0.425
PCH_Pc13g09020 Penicillium rubens PCH_Pc13g09020 I 0.425
U727_00431321111 Penicillium solitum U727_00431321111 I 0.425
EPUS_00081 Endocarpon pusillum EPUS_00081 I 0.425
PITC_061650 Penicillium italicum PITC_061650 I 0.425
PEX1_089460 Penicillium expansum PEX1_089460 I 0.425
SEPMUDRAFT_150255 Sphaerulina musiva SEPMUDRAFT_150255 I 0.422
MYCFIDRAFT_57980 Pseudocercospora fijiensis MYCFIDRAFT_57980 I 0.422
Mycgr3G90433 Zymoseptoria tritici Mycgr3G90433 I 0.422
AUEXF2481DRAFT_68224 Aureobasidium subglaciale AUEXF2481DRAFT_68224 I 0.422
2032_YBR089C-A Saccharomyces bayanus 2032_YBR089C-A I 0.422
OIDMADRAFT_143526 Oidiodendron maius OIDMADRAFT_143526 I 0.422
SU7_0186 Saccharomyces arboricola SU7_0186 I 0.422
NHP6B Saccharomyces cerevisiae YBR089C-A D 0.422
PGUG_05245 Candida guilliermondii PGUG_05245 I 0.422
fgenesh1_pg.C_chr_2000123 Mycosphaerella graminicola fgenesh1_pg.C_chr_2000123 I 0.422
estExt_Genewise1Plus.C_80270 Mycosphaerella fijiensis estExt_Genewise1Plus.C_80270 I 0.422
1377_YBR089C-A Saccharomyces paradoxus 1377_YBR089C-A I 0.422
SKUD_201106 Saccharomyces kudriavzevii SKUD_201106 I 0.422
906_YBR089C-A Saccharomyces mikatae 906_YBR089C-A I 0.422
LELG_04337 Lodderomyces elongisporus LELG_04337 I 0.422
G210_1137 Candida maltosa G210_1137 I 0.422
KUCA_T00001555001 Kuraishia capsulata KUCA_T00001555001 I 0.422
PGUG_05245 Meyerozyma guilliermondii PGUG_05245 I 0.422
17746 Aureococcus anophagefferens 17746 I 0.421
L804_02852 Cryptococcus gattii L804_02852 I 0.420
CANTEDRAFT_110112 Candida tenuis CANTEDRAFT_110112 I 0.420
CNF04730 Cryptococcus neoformans CNF04730 I 0.420
estExt_fgenesh3_kg.C_50121 Heterobasidion annosum estExt_fgenesh3_kg.C_50121 I 0.419
HETIRDRAFT_440787 Heterobasidion irregulare HETIRDRAFT_440787 I 0.419
BOTBODRAFT_30512 Botryobasidium botryosum BOTBODRAFT_30512 N 0.418
cassava42372.valid.m1 Manihot esculenta cassava42372.valid.m1 I 0.417
cassava42371.valid.m1 Manihot esculenta cassava42371.valid.m1 I 0.417
cassava42373.valid.m1 Manihot esculenta cassava42373.valid.m1 I 0.417
cassava44923.m1 Manihot esculenta cassava44923.m1 I 0.417
SELMODRAFT_159743 Selaginella moellendorffii SELMODRAFT_159743 I 0.417
SELMODRAFT_166865 Selaginella moellendorffii SELMODRAFT_166865 I 0.417
ENSMMUP00000037751 Macaca fascicularis ENSMMUP00000037751 N 0.416
E5Q_00406 Mixia osmundae E5Q_00406 I 0.415
PGTG_04701 Puccinia graminis PGTG_04701 I 0.415