GRMZM2G145968 (Zea mays)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 GRMZM2G145968 T330335_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G145968_P01 Sox 19 90
GRMZM2G145968_P03 Sox 19 90

Links

Other Sox family TFs
Other Zea mays TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Sb06g025440 Sorghum bicolor Sb06g025440 N 0.708
Pavir.Ga01019 Panicum virgatum Pavir.Ga01019 N 0.594
Pavir.Gb00881 Panicum virgatum Pavir.Gb00881 N 0.594
Traes_2AL_020BC1DF2 Triticum aestivum Traes_2AL_020BC1DF2 N 0.530
Traes_2BL_3EF023231 Triticum aestivum Traes_2BL_3EF023231 N 0.530
MLOC_57354 Hordeum vulgare MLOC_57354 N 0.500
Si011290m.g Setaria italica Si011290m.g N 0.478
BRADI5G18460 Brachypodium distachyon BRADI5G18460 N 0.458
Traes_2DL_6CACFD720 Triticum aestivum Traes_2DL_6CACFD720 N 0.438
F775_06533 Aegilops tauschii F775_06533 N 0.438
evm.TU.supercontig_19.183 Carica papaya evm.TU.supercontig_19.183 I 0.435
OPUNC04G19550 Oryza punctata OPUNC04G19550 N 0.434
SELMODRAFT_38818 Selaginella moellendorffii SELMODRAFT_38818 I 0.429
SELMODRAFT_175895 Selaginella moellendorffii SELMODRAFT_175895 I 0.429
ORGLA04G0188600 Oryza glaberrima ORGLA04G0188600 N 0.428
OS04G0564600 Oryza sativa OS04G0564600 N 0.428
ORUFI04G23400 Oryza rufipogon ORUFI04G23400 N 0.428
ONIVA04G20340 Oryza nivara ONIVA04G20340 N 0.428
OBART04G21800 Oryza barthii OBART04G21800 N 0.428
LPERR04G17840 Leersia perrieri LPERR04G17840 N 0.428
OB04G28810 Oryza brachyantha OB04G28810 N 0.428
BGIOSGA016928 Oryza indica BGIOSGA016928 N 0.428
OGLUM04G21840 Oryza glumaepatula OGLUM04G21840 N 0.428
OMERI04G18350 Oryza meridionalis OMERI04G18350 N 0.428
Pavir.J38684 Panicum virgatum Pavir.J38684 N 0.418
Pavir.J40489 Panicum virgatum Pavir.J40489 N 0.418
LPERR02G22240 Leersia perrieri LPERR02G22240 N 0.418
GRMZM2G156785 Zea mays GRMZM2G156785 N 0.418
Si018635m.g Setaria italica Si018635m.g N 0.418
GRMZM2G013821 Zea mays GRMZM2G013821 N 0.418
BRADI3G51140 Brachypodium distachyon BRADI3G51140 N 0.418
OBART02G27340 Oryza barthii OBART02G27340 N 0.418
OMERI02G26620 Oryza meridionalis OMERI02G26620 N 0.418
OPUNC02G25020 Oryza punctata OPUNC02G25020 N 0.418
BGIOSGA008782 Oryza indica BGIOSGA008782 N 0.418
ORUFI02G28820 Oryza rufipogon ORUFI02G28820 N 0.418
OS02G0670400 Oryza sativa OS02G0670400 N 0.418
ONIVA02G29880 Oryza nivara ONIVA02G29880 N 0.418
Sb04g032180 Sorghum bicolor Sb04g032180 N 0.418
OGLUM02G27900 Oryza glumaepatula OGLUM02G27900 N 0.418
OB02G34710 Oryza brachyantha OB02G34710 N 0.418