gw1.32.10.1 (Bigelowiella natans)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 gw1.32.10.1 T330458_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
JGI_V11_19447 Sox 534 602

Links

Other Sox family TFs
Other Bigelowiella natans TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
HMGB2 Arabidopsis lyrata fgenesh2_kg.1__2255__AT1G20693.2 I 0.416
HMGB2 Arabidopsis thaliana AT1G20693 I 0.416
Bostr.7128s0663 Boechera stricta Bostr.7128s0663 I 0.416
BOTBODRAFT_30512 Botryobasidium botryosum BOTBODRAFT_30512 N 0.457
Bra033055 Brassica rapa Bra033055 N 0.476
Cagra.6160s0028 Capsella grandiflora Cagra.6160s0028 I 0.416
Carubv10010586m.g Capsella rubella Carubv10010586m.g I 0.416
CHLREDRAFT_192899 Chlamydomonas reinhardtii CHLREDRAFT_192899 N 0.415
CHLREDRAFT_142283 Chlamydomonas reinhardtii CHLREDRAFT_142283 N 0.429
IGS.gm_15_00221 Chlorella NC64A IGS.gm_15_00221 I 0.433
estExt_Genewise1.C_130158 Chlorella vulgaris estExt_Genewise1.C_130158 I 0.520
estExt_fgenesh1_pm.C_130068 Coccomyxa subellipsoidea C169 estExt_fgenesh1_pm.C_130068 I 0.520
gw1.204.1.1 Dictyostelium purpureum gw1.204.1.1 I 0.441
estExt_fgeneshDP_kg.C_1050006 Dictyostelium purpureum estExt_fgeneshDP_kg.C_1050006 I 0.451
Thhalv10017360m.g Eutrema salsugineum Thhalv10017360m.g N 0.426
gene18862-v1.0-hybrid Fragaria vesca gene18862-v1.0-hybrid I 0.442
cassava42041.valid.m1 Manihot esculenta cassava42041.valid.m1 I 0.441
MELLADRAFT_31192 Melampsora laricipopulina MELLADRAFT_31192 I 0.421
Pavir.Eb02691 Panicum virgatum Pavir.Eb02691 I 0.417
fgenesh1_pg.C_scaffold_9000255 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_9000255 I 0.423
PGTG_04701 Puccinia graminis PGTG_04701 I 0.458
PTTG_09594 Puccinia triticina PTTG_09594 I 0.458
29822.m003476 Ricinus communis 29822.m003476 I 0.441
O9G_002262 Rozella allomycis O9G_002262 I 0.449
SPOG_00531 Schizosaccharomyces cryophilus SPOG_00531 I 0.421
SOCG_02294 Schizosaccharomyces octosporus SOCG_02294 I 0.423
SPPG_05251 Spizellomyces punctatus SPPG_05251 I 0.451
SPPG_03502 Spizellomyces punctatus SPPG_03502 N 0.481
M407DRAFT_81488 Tulasnella calospora M407DRAFT_81488 I 0.455
estExt_Genewise1.C_10428 Volvox carteri estExt_Genewise1.C_10428 N 0.471
estExt_Genewise1.C_510099 Volvox carteri estExt_Genewise1.C_510099 N 0.485
estExt_Genewise1.C_690028 Volvox carteri estExt_Genewise1.C_690028 N 0.442
WALSEDRAFT_53977 Wallemia sebi WALSEDRAFT_53977 I 0.433