H072_4754 (Dactylellina haptotyla)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 H072_4754 T330476_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NHP6B
M01565_2.00
Saccharomyces cerevisiae
NNWHWRYDNN

NNHRYWDWNN
PBM
Zhu et al.(2009)
Nhp6b
0.574 0.681
NHP6A
M01566_2.00
Saccharomyces cerevisiae
NHRYWWWN

NWWWRYDN
PBM
Zhu et al.(2009)
Nhp6a
0.574 0.681
NHP6B
M08603_2.00
Saccharomyces cerevisiae
HNTHHNWWTATAWWWWRNDN

NHNYWWWWTATAWWNDDAND
Misc
DeBoer et al.(2011)
YBR089C-A_792
0.574 0.681
NHP6A
M08606_2.00
Saccharomyces cerevisiae
DNDHNNWTATATADWRDNNDN

NHNNHYWHTATATAWNNDHNH
Misc
DeBoer et al.(2011)
YPR052C_879
0.574 0.681
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EPS41355 Sox 25 93

Links

Other Sox family TFs
Other Dactylellina haptotyla TFs

342 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_32546 Aegilops tauschii F775_32546 N 0.000
Aquca_108_00051 Aquilegia coerulea Aquca_108_00051 N 0.000
Bo1g147290 Brassica oleracea Bo1g147290 N 0.000
Bra040015 Brassica rapa Bra040015 N 0.000
PK16646.1 Cannabis sativa PK16646.1 N 0.000
evm.TU.supercontig_9.326 Carica papaya evm.TU.supercontig_9.326 N 0.000
Cla012999 Citrullus lanatus Cla012999 N 0.000
Ciclev10021850m.g Citrus clementina Ciclev10021850m.g N 0.000
orange1.1g024388m.g Citrus sinensis orange1.1g024388m.g N 0.000
orange1.1g025458m.g Citrus sinensis orange1.1g025458m.g N 0.000
Eucgr.G02017 Eucalyptus grandis Eucgr.G02017 N 0.000
Thhalv10001777m.g Eutrema salsugineum Thhalv10001777m.g N 0.000
gene17671-v1.0-hybrid Fragaria vesca gene17671-v1.0-hybrid N 0.000
GLYMA11G13420 Glycine max GLYMA11G13420 N 0.000
GLYMA12G05410 Glycine max GLYMA12G05410 N 0.000
Gorai.011G138900 Gossypium raimondii Gorai.011G138900 N 0.000
Gorai.N001000 Gossypium raimondii Gorai.N001000 N 0.000
Gorai.007G162200 Gossypium raimondii Gorai.007G162200 N 0.000
Lus10025582.g Linum usitatissimum Lus10025582.g N 0.000
Lus10025581.g Linum usitatissimum Lus10025581.g N 0.000
Lus10027045.g Linum usitatissimum Lus10027045.g N 0.000
MDP0000184998 Malus domestica MDP0000184998 N 0.000
MDP0000716430 Malus domestica MDP0000716430 N 0.000
MTR_2g099155 Medicago truncatula MTR_2g099155 N 0.000
mgf000871m Mimulus guttatus mgf000871m N 0.000
GSMUA_Achr3G19260_001 Musa acuminata GSMUA_Achr3G19260_001 N 0.000
GSMUA_Achr9G08210_001 Musa acuminata GSMUA_Achr9G08210_001 N 0.000
GSMUA_Achr6G28720_001 Musa acuminata GSMUA_Achr6G28720_001 N 0.000
Pavir.Ga01503 Panicum virgatum Pavir.Ga01503 N 0.000
POPTR_0014s17210 Populus trichocarpa POPTR_0014s17210 N 0.000
POPTR_0017s05170 Populus trichocarpa POPTR_0017s05170 N 0.000
Pm007242 Prunus mume Pm007242 N 0.000
PRUPE_ppa010592mg Prunus persica PRUPE_ppa010592mg N 0.000
30001.m000076 Ricinus communis 30001.m000076 N 0.000
SapurV1A.0947s0070 Salix purpurea SapurV1A.0947s0070 N 0.000
SapurV1A.1186s0090 Salix purpurea SapurV1A.1186s0090 N 0.000
Si010917m.g Setaria italica Si010917m.g N 0.000
Solyc08g013980.2 Solanum lycopersicum Solyc08g013980.2 N 0.000
PGSC0003DMG400020996 Solanum tuberosum PGSC0003DMG400020996 N 0.000
Sb06g021360 Sorghum bicolor Sb06g021360 N 0.000
TCM_019968 Theobroma cacao TCM_019968 N 0.000
TCM_002550 Theobroma cacao TCM_002550 N 0.000
Traes_2DL_B72450387 Triticum aestivum Traes_2DL_B72450387 N 0.000
Traes_2BL_7B5109B55 Triticum aestivum Traes_2BL_7B5109B55 N 0.000
Traes_2AL_6990211D0 Triticum aestivum Traes_2AL_6990211D0 N 0.000
VIT_00s0226g00140 Vitis vinifera VIT_00s0226g00140 N 0.000
GRMZM2G053557 Zea mays GRMZM2G053557 N 0.000