HelroG167700 (Helobdella robusta)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 HelroG167700 T330541_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
HelroP167700 Sox 1 44

Links

Other Sox family TFs
Other Helobdella robusta TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
OESDEN_13669 Oesophagostomum dentatum OESDEN_13669 N 0.517
36550 Aureococcus anophagefferens 36550 N 0.514
ASIM_0000075001 Anisakis simplex ASIM_0000075001 N 0.500
PV06_10806 Exophiala oligosperma PV06_10806 N 0.498
EMIHUDRAFT_453575 Emiliania huxleyi EMIHUDRAFT_453575 N 0.496
EMIHUDRAFT_251194 Emiliania huxleyi EMIHUDRAFT_251194 N 0.494
EFA77534.1 Polysphondylium pallidum EFA77534.1 N 0.492
GLYMA20G01570 Glycine max GLYMA20G01570 N 0.491
TRAES3BF116200180CFD_g Triticum aestivum TRAES3BF116200180CFD_g N 0.474
HMG20A Pteropus vampyrus ENSPVAG00000003321 N 0.472
Traes_7BL_F45C15FA2 Triticum aestivum Traes_7BL_F45C15FA2 N 0.469
MCINX003696 Melitaea cinxia MCINX003696 N 0.463
Gorai.002G115100 Gossypium raimondii Gorai.002G115100 I 0.462
orange1.1g031906m.g Citrus sinensis orange1.1g031906m.g I 0.462
AWRI1499_3370 Brettanomyces bruxellensis AWRI1499_3370 N 0.461
ANCDUO_13942 Ancylostoma duodenale ANCDUO_13942 N 0.459
ANCCAN_05715 Ancylostoma caninum ANCCAN_05715 N 0.454
D917_08464 Trichinella nativa D917_08464 N 0.454
TRIUR3_17277 Triticum urartu TRIUR3_17277 N 0.454
D917_01243 Trichinella nativa D917_01243 N 0.454
EMIHUDRAFT_108701 Emiliania huxleyi EMIHUDRAFT_108701 N 0.453
SapurV1A.0237s0190 Salix purpurea SapurV1A.0237s0190 N 0.452
Myotis_brandtii_TFAM_10031378 Myotis brandtii Myotis_brandtii_TFAM_10031378 N 0.443
HmN_000301900 Hymenolepis microstoma HmN_000301900 N 0.441
67303 Aureococcus anophagefferens 67303 N 0.441
DICVIV_04699 Dictyocaulus viviparus DICVIV_04699 N 0.441
BGLB013830 Biomphalaria glabrata BGLB013830 N 0.441
OESDEN_19415 Oesophagostomum dentatum OESDEN_19415 N 0.438
fgenesh1_pg.sca_3_chr4_2_0000426 Nectria haematococca fgenesh1_pg.sca_3_chr4_2_0000426 N 0.437
NechaG79025 Fusarium solani NechaG79025 N 0.437
yakG000714 Bos grunniens yakG000714 N 0.436
BN7_5034 Wickerhamomyces ciferrii BN7_5034 N 0.435
GF20527 Drosophila ananassae FBgn0097533 N 0.435
Traes_7AL_364A6E96F Triticum aestivum Traes_7AL_364A6E96F N 0.434
MDP0000242568 Malus domestica MDP0000242568 I 0.434
PDK_20s1781681g001 Phoenix dactylifera PDK_20s1781681g001 N 0.434
Traes_7DL_0CEFCB39D Triticum aestivum Traes_7DL_0CEFCB39D N 0.434
GPLIN_000847800 Globodera pallida GPLIN_000847800 N 0.433
SVUK_0000827101 Strongylus vulgaris SVUK_0000827101 N 0.432
Minc18937 Meloidogyne incognita Minc18937 N 0.432
EFA85451.1 Polysphondylium pallidum EFA85451.1 N 0.432
estExt_fgeneshDP_kg.C_1020010 Dictyostelium purpureum estExt_fgeneshDP_kg.C_1020010 N 0.432
DDB_G0287073 Dictyostelium discoideum DDB_G0287073 N 0.432
PPAI008151 Phlebotomus papatasi PPAI008151 N 0.429
M7I_1506 Glarea lozoyensis M7I_1506 N 0.428
Hmg20b Mus musculus ENSMUSG00000020232 D 0.427
LCUP018488 Lucilia cuprina LCUP018488 N 0.427
CaO19.400 Candida albicans CaO19.400 N 0.422
OESDEN_23252 Oesophagostomum dentatum OESDEN_23252 N 0.422
CaO19.8030 Candida albicans CaO19.8030 N 0.422
TTAC_0000838901 Hydatigera taeniaeformis TTAC_0000838901 N 0.416
ANCDUO_24624 Ancylostoma duodenale ANCDUO_24624 N 0.416
GLOINDRAFT_335861 Rhizophagus irregularis GLOINDRAFT_335861 N 0.415
TCNE_0000669501 Toxocara canis TCNE_0000669501 N 0.415
DILT_0001419401 Diphyllobothrium latum DILT_0001419401 N 0.415