KAFR_0F02510 (Kazachstania africana)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 KAFR_0F02510 T330763_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NHP10
M00068_2.00
Saccharomyces cerevisiae
TCCCCGGC

GCCGGGGA
PBM
Badis et al.(2008)
NHP10_2069
0.662 0.831
NHP10
M07496_2.00
Saccharomyces cerevisiae
YCCCCGGY

RCCGGGGR
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0344.1
0.662 0.831
NHP10
M08604_2.00
Saccharomyces cerevisiae
TCCCCGGY

RCCGGGGA
Misc
DeBoer et al.(2011)
YDL002C_502
0.662 0.831
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CCF58848 Sox 105 169

Links

Other Sox family TFs
Other Kazachstania africana TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
NHP10 Saccharomyces cerevisiae YDL002C D 0.662
CAGL0M10505g Candida glabrata CAGL0M10505g I 0.577
TPHA_0P00560 Tetrapisispora phaffii TPHA_0P00560 I 0.542
ZBAI_02112 Zygosaccharomyces bailii ZBAI_02112 I 0.484
ZBAI_07968 Zygosaccharomyces bailii ZBAI_07968 I 0.484
ZYRO0A04378g Zygosaccharomyces rouxii ZYRO0A04378g I 0.484
Scas_Contig482.3 Saccharomyces castellii Scas_Contig482.3 I 0.599
3225_YDL002C Saccharomyces mikatae 3225_YDL002C I 0.662
3735_YDL002C Saccharomyces paradoxus 3735_YDL002C I 0.662
TDEL_0D04120 Torulaspora delbrueckii TDEL_0D04120 I 0.487
TBLA_0A00160 Tetrapisispora blattae TBLA_0A00160 I 0.554
CD36_81110 Candida dubliniensis CD36_81110 I 0.449
G210_3517 Candida maltosa G210_3517 I 0.470
KNAG_0K01480 Kazachstania naganishii KNAG_0K01480 I 0.623
Kpol_1045p57 Vanderwaltozyma polyspora Kpol_1045p57 I 0.539
NCAS_0A10110 Naumovozyma castellii NCAS_0A10110 I 0.599
NDAI_0A07360 Naumovozyma dairenensis NDAI_0A07360 I 0.642
SKUD_167206 Saccharomyces kudriavzevii SKUD_167206 I 0.662
603_YDL002C Saccharomyces bayanus 603_YDL002C I 0.662
gwh1.8.1.855.1 Pichia stipitis gwh1.8.1.855.1 N 0.420
PICST_12709 Scheffersomyces stipitis PICST_12709 N 0.420
YALI0_D17996g Yarrowia lipolytica YALI0_D17996g N 0.422