KGM_16790 (Danaus plexippus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 KGM_16790 T330782_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
bbx
M03975_2.00
Drosophila melanogaster
NAACAATDNCATTGTTN

NAACAATGNHATTGTTN
SELEX
Nitta et al.(2015)
bbx_1
0.630 0.723
BBX
M05763_2.00
Homo sapiens
TGAWCDNYGWTCA

TGAWCRNHGWTCA
SELEX
Yin et al.(2017)
BBX_eDBD_HT-SELEX
0.489 0.646
BBX
M05764_2.00
Homo sapiens
TGAACDNYGTTCA

TGAACRNHGTTCA
SELEX
Yin et al.(2017)
BBX_eDBD_Methyl-HT-SELEX
0.489 0.646
Bbx
M00196_2.00
Mus musculus
TTCATTGA

TCAATGAA
PBM
Badis et al.(2009)
Bbx_3753
0.455 0.631
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EHJ73223 Sox 1 65

Links

Other Sox family TFs
Other Danaus plexippus TFs

Invalid Input OrderBy

113 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action