Kpol_1045p57 (Vanderwaltozyma polyspora)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 Kpol_1045p57 T330813_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NHP10
M00068_2.00
Saccharomyces cerevisiae
TCCCCGGC

GCCGGGGA
PBM
Badis et al.(2008)
NHP10_2069
0.604 0.769
NHP10
M07496_2.00
Saccharomyces cerevisiae
YCCCCGGY

RCCGGGGR
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0344.1
0.604 0.769
NHP10
M08604_2.00
Saccharomyces cerevisiae
TCCCCGGY

RCCGGGGA
Misc
DeBoer et al.(2011)
YDL002C_502
0.604 0.769
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EDO18070 Sox 94 158

Links

Other Sox family TFs
Other Vanderwaltozyma polyspora TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TPHA_0P00560 Tetrapisispora phaffii TPHA_0P00560 I 0.641
CAGL0M10505g Candida glabrata CAGL0M10505g I 0.617
TBLA_0A00160 Tetrapisispora blattae TBLA_0A00160 I 0.610
NHP10 Saccharomyces cerevisiae YDL002C D 0.604
3225_YDL002C Saccharomyces mikatae 3225_YDL002C I 0.604
603_YDL002C Saccharomyces bayanus 603_YDL002C I 0.604
SKUD_167206 Saccharomyces kudriavzevii SKUD_167206 I 0.604
3735_YDL002C Saccharomyces paradoxus 3735_YDL002C I 0.604
NDAI_0A07360 Naumovozyma dairenensis NDAI_0A07360 I 0.596
KNAG_0K01480 Kazachstania naganishii KNAG_0K01480 I 0.591
Scas_Contig482.3 Saccharomyces castellii Scas_Contig482.3 I 0.568
TDEL_0D04120 Torulaspora delbrueckii TDEL_0D04120 I 0.568
NCAS_0A10110 Naumovozyma castellii NCAS_0A10110 I 0.568
ZBAI_07968 Zygosaccharomyces bailii ZBAI_07968 I 0.567
ZBAI_02112 Zygosaccharomyces bailii ZBAI_02112 I 0.567
ZYRO0A04378g Zygosaccharomyces rouxii ZYRO0A04378g I 0.560
KAFR_0F02510 Kazachstania africana KAFR_0F02510 I 0.539
AACERI_AaceriAEL005C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAEL005C I 0.443
YALI0_D17996g Yarrowia lipolytica YALI0_D17996g N 0.443
Ecym_5292 Eremothecium cymbalariae Ecym_5292 I 0.443
G210_3517 Candida maltosa G210_3517 I 0.439
AGOS_AEL005C Ashbya gossypii AGOS_AEL005C N 0.437
SAKL0C11308g Lachancea kluyveri SAKL0C11308g N 0.430
Kwal_11003 Kluyveromyces waltii Kwal_11003 N 0.426
KLTH0G16566g Kluyveromyces thermotolerans KLTH0G16566g N 0.426
KLTH0G16566g Lachancea thermotolerans KLTH0G16566g N 0.426