Kpol_348p11 (Vanderwaltozyma polyspora)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 Kpol_348p11 T330816_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
IXR1
M08429_2.00
Saccharomyces cerevisiae
CMCCGCTYCCGGYTT

AARCCGGRAGCGGKG
ChIP-chip
Mathelier et al.(2014)
MA0323.1
0.680 0.868
IXR1
M11345_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$IXR1_01
0.680 0.868
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EDO14907 Sox 241 309
EDO14907 Sox 314 380

Links

Other Sox family TFs
Other Vanderwaltozyma polyspora TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
13553_YKL032C Saccharomyces mikatae 13553_YKL032C I 0.680
13606_Multiple Saccharomyces paradoxus 13606_Multiple I 0.563
14658_YKL032C Saccharomyces bayanus 14658_YKL032C I 0.680
AACERI_AaceriAGL073CA Saccharomycetaceae sp ashbya aceri AACERI_AaceriAGL073CA I 0.619
AGOS_AGL073CA Ashbya gossypii AGOS_AGL073CA I 0.619
CAGL0L02013g Candida glabrata CAGL0L02013g I 0.674
Ecym_7252 Eremothecium cymbalariae Ecym_7252 I 0.610
KAFR_0J00330 Kazachstania africana KAFR_0J00330 I 0.683
KLLA0_E18481g Kluyveromyces lactis KLLA0_E18481g I 0.589
KLTH0D06908g Lachancea thermotolerans KLTH0D06908g I 0.592
KLTH0D06908g Kluyveromyces thermotolerans KLTH0D06908g I 0.592
KNAG_0A07060 Kazachstania naganishii KNAG_0A07060 I 0.686
Kwal_8043 Kluyveromyces waltii Kwal_8043 I 0.593
LALA0_S02e01376g Lachancea lanzarotensis LALA0_S02e01376g I 0.582
NCAS_0A04790 Naumovozyma castellii NCAS_0A04790 I 0.682
NDAI_0K01850 Naumovozyma dairenensis NDAI_0K01850 I 0.685
SAKL0A09548g Lachancea kluyveri SAKL0A09548g I 0.569
SU7_2018 Saccharomyces arboricola SU7_2018 I 0.680
TBLA_0G02260 Tetrapisispora blattae TBLA_0G02260 I 0.684
TDEL_0A03100 Torulaspora delbrueckii TDEL_0A03100 I 0.692
TPHA_0C04200 Tetrapisispora phaffii TPHA_0C04200 N 0.418
TPHA_0G03540 Tetrapisispora phaffii TPHA_0G03540 I 0.741
IXR1 Saccharomyces cerevisiae YKL032C D 0.680
ZBAI_03824 Zygosaccharomyces bailii ZBAI_03824 I 0.691
ZBAI_09505 Zygosaccharomyces bailii ZBAI_09505 I 0.691
ZYRO0B02068g Zygosaccharomyces rouxii ZYRO0B02068g I 0.679